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. 2020 Nov 6;126(3):410–423. doi: 10.1038/s41437-020-00383-9

Table 1.

Average age of alternate alleles from BTA25, expressed in Time to the Most Recent Common Ancestor (TMRCA), estimated with GEVA and using the recombination clock.

Alternate alleles Private alternate alleles
Allele frequency Number of alleles Average TMRCA Number of alleles Average TMRCA
0 <. ≤ 0.05 59,943 604 19,108 361
0.05 <. ≤ 0.15 50,596 1284 6136 564
0.15 <. ≤ 0.30 43,931 1820 1633 772
.> 0.30 76,281 2946 180 4851

The time is measured in generations. Private alleles refer to alleles absent from a whole-genome sequence data sample available for another breed (Belgian Blue cattle). Private alleles are selected to enrich the set of SNPs in young alleles.