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. 2021 Mar 25;12:637068. doi: 10.3389/fmicb.2021.637068

Table 2.

Thirteen isolates obtained from rhizospheric soil samples after enrichment, their species identities and corresponding ASVs recovered in metabarcoding.

Soil Isolate ID Identified as Most similar ASV ID% ASV identified as
S02 2 Phytophthora plurivora ASV117 98.4 Phytophthora plurivora
S02 13 Phytophthora cambivora ASV6 100 Phytophthora cambivora
S03 8 Phytophthora gonapodyides ASV18 100 Phytophthora gonapodyides
S04 10 Phytopythium citrinum ASV385 98.5 Phytopythium citrinum
S09 1 Phytophthora plurivora ASV117 100 Phytophthora plurivora
S29 9 Phytophthora plurivora ASV117 100 Phytophthora plurivora
S29 12 Phytopythium citrinum ASV385 100 Phytopythium citrinum
S30 11 Phytophthora gonapodyides ASV18 99.1 Phytophthora gonapodyides
S46 6 Phytopythium vexans ASV267 100 Phytopythium vexans
S48 3 Phytophthora cambivora ASV6 100 Phytophthora cambivora
S51 4 Phytophthora gonapodyides ASV18 99.6 Phytophthora gonapodyides
S57 7 Phytopythium vexans ASV286 100 Phytopythium vexans
S58 5 Phytopythium vexans ASV286 99.6 Phytopythium vexans

For each isolate, the soil sample it was recovered from (S01–S64), the species it was identified as based on the full ITS sequence, and the most similar ASV are given. Percent (ID%) refer to nucleotide similarity between these ASVs and corresponding isolate’s ITS sequence (obtained by Sanger sequencing) over the length of the ASV (approximately 170–270 bp).