Table 2. Comparison of segmentation IoU scores for different weight initialization methods versus the best results on each benchmark as reported in the publication presenting the segmentation task.
All IoU scores are the average of five independent runs. References listed after the benchmark names indicate the sources for Reported IoU scores.
| Benchmark | Training Iterations | Random Init. | IN-super | IN-moco | CEM500K-moco | Reported |
|---|---|---|---|---|---|---|
| All Mitochondria | 10000 | 0.587 | 0.653 | 0.653 | 0.770 | – |
| CREMI Synaptic Clefts | 5000 | 0.000 | 0.196 | 0.226 | 0.254 | – |
| Guay (Guay et al., 2020) | 1000 | 0.308 | 0.275 | 0.300 | 0.429 | 0.417 |
| Kasthuri++ (Casser et al., 2018) | 10000 | 0.905 | 0.908 | 0.911 | 0.915 | 0.845 |
| Lucchi++ (Casser et al., 2018) | 10000 | 0.894 | 0.865 | 0.892 | 0.895 | 0.888 |
| Perez (Perez et al., 2014) | 2500 | 0.672 | 0.886 | 0.883 | 0.901 | 0.821 |
| Lysosomes | – | 0.842 | 0.838 | 0.816 | 0.849 | 0.726 |
| Mitochondria | – | 0.130 | 0.860 | 0.866 | 0.884 | 0.780 |
| Nuclei | – | 0.984 | 0.987 | 0.986 | 0.988 | 0.942 |
| Nucleoli | – | 0.731 | 0.859 | 0.865 | 0.885 | 0.835 |
| UroCell | 2500 | 0.424 | 0.584 | 0.618 | 0.734 | – |