Table 4.
Regulation pattern in periodontitis | Crosstalk genes linking periodontitis and Alzheimer's disease |
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Upregulated | AMIGO1 (adhesion molecule with Ig-like domain 1; gene ID: 57463) ARG2 (arginase 2; gene ID: 384) BDKRB2 (bradykinin receptor B2; gene ID: 624) BRI3 (brain protein I3; gene ID: 25798) C1D (C1D nuclear receptor corepressor; gene ID: 10438) C3 (complement C3; gene ID: 718) C4A (complement C4A (Rodgers blood group); gene ID: 720) C4B (complement C4B; gene ID: 721) C4B_2 (complement component 4B (Chido blood group), copy 2; gene ID: 100293534) CASP7 (caspase 7; gene ID: 840) CD177 (CD177 molecule; gene ID: 57126) CD38 (CD38 molecule; gene ID: 952) CHCHD10 (coiled-coil-helix-coiled-coil-helix domain containing 10; gene ID: 400916) COX8A (cytochrome c oxidase subunit 8A; gene ID: 1351) CSF3 (colony-stimulating factor 3; gene ID: 1440) CTGF (cellular communication network factor 2; gene ID: 1490) CTSS (cathepsin S; gene ID: 1520) CXCL1 (C-X-C motif chemokine ligand 1; gene ID: 2919) CXCL12 (C-X-C motif chemokine ligand 12; gene ID: 6387) CXCL8 (C-X-C motif chemokine ligand 8; gene ID: 3576) CXCR4 (C-X-C motif chemokine receptor 4; gene ID: 7842) ENPP2 (ectonucleotide pyrophosphatase/phosphodiesterase 2; gene ID: 5168) FCGR3A (Fc fragment of IgG receptor IIIa; gene ID: 2214) FCGR3B (Fc fragment of IgG receptor IIIb; gene ID: 2215) FHL2 (four and a half LIM domains 2; gene ID: 2274) FOS (Fos proto-oncogene, AP-1 transcription factor subunit; gene ID: 2353) FOXO1 (forkhead box O1; gene ID: 2308) GSTK1 (glutathione S-transferase kappa 1; gene ID: 373156) GSTO1 (glutathione S-transferase omega 1; gene ID: 9446) HCLS1 (hematopoietic cell-specific Lyn substrate 1; gene ID: 3059) IGFBP7 (insulin-like growth factor binding protein 7; gene ID: 3490) IL1B (interleukin-1 beta; gene ID: 3553) LYZ (lysozyme; gene ID: 4069) MAK16 (MAK16 homolog; gene ID: 84549) MEF2C (myocyte-specific enhancer factor 2C; gene ID: 4208) MME (membrane metalloendopeptidase; gene ID: 4311) MMP1 (matrix metallopeptidase 1; gene ID: 4312) MMP3 (matrix metallopeptidase 3; gene ID: 4314) MS4A1 (membrane-spanning 4-domains A1; gene ID: 931) MSRA (methionine sulfoxide reductase A; gene ID: 4482) MZB1 (marginal zone B and B1 cell-specific protein; gene ID: 51237) NDUFB8 (NADH:ubiquinone oxidoreductase subunit B8; gene ID: 4714) PECAM1 (platelet endothelial cell adhesion molecule 1; gene ID: 5175) PLAT (plasminogen activator, tissue type; gene ID: 5327) PSENEN (presenilin enhancer, gamma-secretase subunit; gene ID: 55851) SEL1L (SEL1L adaptor subunit of ERAD E3 ubiquitin ligase; gene ID: 6400) SERPINI1 (serpin family I member 1; gene ID: 5274) ST6GAL1 (ST6 beta-galactoside alpha-2,6-sialyltransferase 1; gene ID: 6480) VCAN (versican; gene ID: 1462) VIM (vimentin; gene ID: 7431) WARS2 (tryptophanyl tRNA synthetase 2, mitochondrial; gene ID: 10352) |
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Downregulated | ABCA12 (ATP binding cassette subfamily A member 12; gene ID: 26154) ACE (angiotensin I converting enzyme; gene ID: 1636) ADRB1 (adrenoceptor beta 1; gene ID: 153) BCL2L2 (BCL2-like 2; gene ID: 599) BRSK1 (BR serine/threonine kinase 1; gene ID: 84446) CALML5 (calmodulin-like 5; gene ID: 51806) CALR (calreticulin; gene ID: 811) CD36 (CD36 molecule; gene ID: 948) CDH1 (cadherin 1; gene ID: 999) CDK5R1 (cyclin-dependent kinase 5 regulatory subunit 1; gene ID: 8851) CTDSP2 (CTD small phosphatase 2; gene ID: 10106) DNM1 (dynamin 1; gene ID: 1759) DSG1 (desmoglein 1; gene ID: 1828) FLG (filaggrin; gene ID: 2312) GJA1 (gap junction protein alpha 1; gene ID: 2697) GRHL3 (grainyhead-like transcription factor 3; gene ID: 57822) GRIN3B (glutamate ionotropic receptor NMDA type subunit 3B; gene ID: 116444) HM13 (histocompatibility minor 13; gene ID: 81502) HMGCR (3-hydroxy-3-methylglutaryl-CoA reductase; gene ID: 3156) HSPB1 (heat shock protein family B (small) member 1; gene ID: 3315) KAT5 (lysine acetyltransferase 5; gene ID: 10524) MAP3K12 (mitogen-activated protein kinase kinase kinase 12; gene ID: 7786) MED12 (mediator complex subunit 12; gene ID: 9968) MFN2 (mitofusin 2; gene ID: 9927) MYC (MYC proto-oncogene, bHLH transcription factor; gene ID: 4609) NEFL (neurofilament light; gene ID: 4747) NES (exportin 1; gene ID: 7514) NGF (nerve growth factor; gene ID: 4803) NOS3 (nitric oxide synthase 3; gene ID: 4846) NPTXR (neuronal pentraxin receptor; gene ID: 23467) PLXNA3 (plexin A3; gene ID: 55558) PPIL2 (peptidylprolyl isomerase-like 2; gene ID: 23759) PTGS1 (prostaglandin-endoperoxide synthase 1; gene ID: 5742) RPL13 (ribosomal protein L13; gene ID: 6137) SCIMP (SLP adaptor and CSK interacting membrane protein; gene ID: 388325) SPPL2B (signal peptide peptidase-like 2B; gene ID: 56928) TIAF1 (TGFB1-induced antiapoptotic factor 1; gene ID: 9220) TP73 (tumor protein P73; gene ID: 7161) TYRP1 (tyrosinase-related protein 1; gene ID: 7306) USF2 (upstream transcription factor 2, C-Fos interacting; gene ID: 7392) VEGFA (vascular endothelial growth factor A; gene ID: 7422) |