Table 2.
List of genes in the newly-sequenced plastomes of L. tetragonum and L. bicolor.
| Category | Group | Name |
|---|---|---|
| Photosynthesis-related genes | Rubisco | rbcL |
| Photosystem 1 | psaA, psaB, psaC, psaI, psaJ | |
| Photosystem 2 | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ | |
| APT synthase | atpA, atpB, atpE, atpF†, atpH, atpI | |
| Cytochrome b/f complex | petA, petB, petD, petG, petL, petN | |
| NADPH Dehydrogenase | ndhA†, ndhB†*, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK | |
| Transcription and translation-related genes | Transcription | rpoA, rpoB, rpoC1†, rpoC2 |
| Ribosomal proteins | rps2, prs3, rps4, rps7*, rps8, rps11, rps12†*, rps14, rps15, rps16†, rps18, rps19 | |
| rpl2†, rpl14, rpl16, rpl20, rpl22, rpl23#*, rpl33, rpl36 | ||
| Translation initiation factor | infA | |
| RNA genes | Ribosomal RNA | rrn5*, rrn4.5*, rrn16*, rrn23* |
| Transfer RNA | trnA-UGC†*, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-UCC, trnH-GUG, trnI-GAU†*, trnK-UUU†, trnL-CAA*, trnL-UAA, trnL-UAG†, trnM-CAU, trnN-GUU*, trnP-UGG, trnQ-UUG, trnR-ACG*, trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC*, trnW-CCA, trnY-GUA | |
| Other genes | RNA processing | matK |
| Carbon metabolism | cemA | |
| Fatty acid synthesis | accD | |
| Proteolysis | clpP† | |
| Genes of unknown function | Conserved reading frame | ycf1†*, ycf2*, ycf3†, ycf4 |
*duplicated genes, †genes with introns, #pseudogenised genes.