Table 1.

Summary of the three real-world datasets used to benchmark the performance of the callers

Name	HPV HIVID	HBV HIVID	HBV WGS
Samples	135	426 × 2	88 × 2
Tissue	Cervical cancer	HCC (tumor/control)	HCC (tumor/control)
Sequencing method	HIVID	HIVID	WGS
Virus integrated	HPV	HBV	HBV
Sensitivity tested by	75 Sanger-validated calls	145 Sanger-validated calls	246 HIVID calls
Precision tested by	RNA-seq	RNA-seq	246 HIVID calls