Table 2.

Summary statistics for the 65 SNPs associated with cognitive function at a suggestive significance level (P < 1×10⁻⁵). SNP positions and distance to nearest gene are based on the GRCh37/hg19 genome build. Nearest gene refers to nearest RefSeq gene. SNPs identified by FUMA as independent SNPs are highlighted in bold. Independent SNPs in LD with candidate SNPs found to replicate (P < 0.05) are marked with *.

SNP	Chr	Position	Locus	Ma	MAF	Beta	P	Nearest Gene	Distance
rs17265690	5	13816888	5p15.2	G	0.0138	13.63	1.22E-07	DNAH5	0 (intron)
rs114012368	5	13845391	5p15.2	G	0.0153	11.14	1.70E-07	DNAH5	0 (intron)
rs187473706*	10	58207108	10q21.1	A	0.1277	−4.579	2.73E-07	ZWINT	86074
rs4405235	10	58103101	10q21.1	G	0.1313	−4.577	2.74E-07	ZWINT	14098
rs11005326	10	58117124	10q21.1	G	0.1313	−4.577	2.74E-07	ZWINT	75
rs11005338	10	58125900	10q21.1	G	0.1313	−4.577	2.74E-07	ZWINT	4866
rs11005320	10	58096959	10q21.1	C	0.1319	−4.564	3.32E-07	ZWINT	20240
rs28502528	3	7210895	3p26.1	G	0.3073	3.391	3.74E-07	GRM7	0 (intron)
rs58796432	10	58208170	10q21.1	T	0.1304	−4.493	4.30E-07	ZWINT	87136
rs11005358	10	58209898	10q21.1	A	0.1304	−4.493	4.30E-07	ZWINT	88864
rs74137635	10	58210671	10q21.1	C	0.1304	−4.493	4.30E-07	ZWINT	89583
rs12266849	10	58218034	10q21.1	G	0.1304	−4.493	4.30E-07	ZWINT	97000
rs12257459	10	58208672	10q21.1	G	0.1303	−4.487	4.94E-07	ZWINT	87638
rs2087837	10	58222830	10q21.1	A	0.1303	−4.487	4.94E-07	ZWINT	101796
rs11005363	10	58237680	10q21.1	C	0.1302	−4.487	4.94E-07	ZWINT	116646
rs58386275	10	58241470	10q21.1	C	0.1301	−4.487	4.94E-07	ZWINT	120436
rs11005366	10	58242596	10q21.1	T	0.1301	−4.487	4.94E-07	ZWINT	121562
rs4935645	10	58021087	10q21.1	C	0.1391	−4.405	5.04E-07	ZWINT	96112
rs2393046	10	58023980	10q21.1	T	0.1388	−4.405	5.04E-07	ZWINT	93219
rs74137642	10	58243119	10q21.1	G	0.1306	−4.427	6.16E-07	ZWINT	122085
rs7091142	10	58244433	10q21.1	T	0.1306	−4.427	6.16E-07	ZWINT	123399
rs141232317	10	58206613	10q21.1	T	0.1208	−4.453	8.32E-07	ZWINT	85579
rs2263916	10	58161893	10q21.1	G	0.1317	−4.386	9.30E-07	ZWINT	40859
rs10763369	10	58175630	10q21.1	A	0.1315	−4.386	9.30E-07	ZWINT	54596
rs10733958	10	58179399	10q21.1	G	0.1315	−4.386	9.30E-07	ZWINT	58365
rs1516302	3	7208953	3p26.1	A	0.3005	3.199	1.24E-06	GRM7	0 (intron)
rs11005287	10	58024579	10q21.1	A	0.1378	−4.246	1.24E-06	ZWINT	92620
rs114240283	5	13799563	5p15.2	A	0.0148	11.63	1.33E-06	DNAH5	0 (intron)
rs12264147	10	58025087	10q21.1	T	0.1387	−4.187	1.62E-06	ZWINT	92112
rs2393054	10	58056974	10q21.1	C	0.1395	−4.167	1.66E-06	ZWINT	60225
rs12257337	10	58062019	10q21.1	T	0.1390	−4.146	1.86E-06	ZWINT	55180
rs7099218	10	58067127	10q21.1	C	0.1390	−4.146	1.86E-06	ZWINT	50072
rs12255620	10	58076723	10q21.1	G	0.1387	−4.146	1.86E-06	ZWINT	40476
rs73280169	10	58077515	10q21.1	T	0.1388	−4.146	1.86E-06	ZWINT	39684
rs114740310	5	13870802	5p15.2	T	0.0144	11.17	1.92E-06	DNAH5	0 (intron)
rs114933297	5	13874625	5p15.2	T	0.0145	11.17	1.92E-06	DNAH5	0 (intron)
rs595286	18	60280097	18q21.33	G	0.4679	−2.964	2.10E-06	ZCCHC2	26121
rs9392881	6	791124	6p25.3	G	0.1214	−4.441	2.42E-06	LOC101927691	77374
rs9392150	6	791318	6p25.3	A	0.1211	−4.421	2.46E-06	LOC101927691	77180
rs62384998	6	791566	6p25.3	C	0.1212	−4.426	2.47E-06	LOC101927691	76932
rs7763687	6	791850	6p25.3	T	0.1212	−4.426	2.47E-06	LOC101927691	76648
rs306213	18	60291954	18q21.33	A	0.3434	−3.146	2.67E-06	ZCCHC2	37978
rs62385000	6	792759	6p25.3	A	0.1214	−4.432	2.79E-06	LOC101927691	75739
rs11005317	10	58088163	10q21.1	G	0.1407	−4.021	2.90E-06	ZWINT	29036
rs3750796	10	58088534	10q21.1	G	0.1407	−4.021	2.90E-06	ZWINT	28665
rs7094892	10	58088575	10q21.1	T	0.1407	−4.021	2.90E-06	ZWINT	28624
rs2393065	10	58089291	10q21.1	C	0.1407	−4.021	2.90E-06	ZWINT	27908
rs9971280	10	58090264	10q21.1	C	0.1406	−4.021	2.90E-06	ZWINT	26935
rs59704796	10	58090554	10q21.1	C	0.1406	−4.021	2.90E-06	ZWINT	26645
rs637216	18	60282910	18q21.33	G	0.4677	−2.919	3.18E-06	ZCCHC2	28934
rs3750795	10	58088644	10q21.1	G	0.1403	−4.012	3.30E-06	ZWINT	28555
rs72773940	10	11148581	10p14	T	0.0287	−8.131	3.58E-06	CELF2	0 (intron)
rs117481327	10	11154826	10p14	G	0.0293	−8.121	3.61E-06	CELF2	0 (intron)
rs2016129*	10	29288295	10p12.1	T	0.0682	5.091	3.84E-06	C10orf126	117468
rs114594327	4	91942029	4q22.1	T	0.0268	7.955	5.09E-06	CCSER1	0 (intron)
rs74897566	3	5083637	3p26.1	C	0.0196	10.88	6.29E-06	BHLHE40	56771
rs306216	18	60295543	18q21.33	G	0.3009	−3.131	6.92E-06	ZCCHC2	41567
rs1556397*	10	24851710	10p12.1	A	0.3311	−2.923	7.86E-06	KIAA1217	14938
rs141363063	9	116670492	9q32	T	0.0110	11.55	8.44E-06	ZNF618	0 (intron)
rs148488001	9	116691092	9q32	G	0.0110	11.55	8.44E-06	ZNF618	0 (intron)
rs192345176	9	116700201	9q32	G	0.0109	11.55	8.44E-06	ZNF618	0 (intron)
rs138203943	9	116704225	9q32	A	0.0109	11.55	8.44E-06	ZNF618	0 (intron)
rs56139919*	6	155914380	6q25.3	A	0.0207	8.531	8.72E-06	LOC105378068	67228
rs489500	1	65525901	1p31.3	G	0.0139	9.476	8.94E-06	JAK1	0 (intron)
rs11007349	10	29287378	10p12.1	T	0.0674	5.102	9.50E-06	C10orf126	116551