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. 2021 Apr 2;13(7):1692. doi: 10.3390/cancers13071692

Table 2.

Haplotype diversity of the entire sequence, and the octamer repeat (OctR), serine repeat (SerR), and non-repeat (NonR) 2562 base pair (bp) regions of the P. falciparum SERA5 gene.

Country n Entire Sequence OctR Region SerR Region NonR 2562 bp Region
No. of
Haplotypes
Hd ± SD No. of
Haplotypes
Hd ± SD No. of
Haplotypes
Hd ± SD No. of
Haplotypes
Hd ± SD
Malawi and Mozambique 115 96 (88) 0.994 ± 0.003 34 (34) 0.809 ± 0.032 42 (39) 0.935 ± 0.011 26 (16) 0.545 ± 0.011
eBL case 63 54 (50) 0.993 ± 0.005 19 (19) 0.786 ± 0.047 28 (27) 0.928 ± 0.019 16 (9) 0.551 ± 0.075
Control 52 47 (45) 0.996 ± 0.002 21 (21) 0.839 ± 0.040 26 (23) 0.945 ± 0.016 14 (9) 0.544 ± 0.083
Tanzania 55 44 (42) 0.991 ± 0.006 21(21) 0.804 ± 0.054 30 (30) 0.968 ± 0.010 11 (9) 0.362 ± 0.084
Ghana 33 31 (29) 0.996 ± 0.009 16 (16) 0.873 ± 0.048 23 (23) 0.968 ± 0.018 8 (7) 0.472 ± 0.106

The numbers of amino acid sequence variations are shown in parenthesis. eBL: endemic Burkitt Lymphoma, Hd: Haplotype diversity, SD: standard deviation