Table 2.
Country | n | Entire Sequence | OctR Region | SerR Region | NonR 2562 bp Region | ||||
---|---|---|---|---|---|---|---|---|---|
No. of Haplotypes |
Hd ± SD | No. of Haplotypes |
Hd ± SD | No. of Haplotypes |
Hd ± SD | No. of Haplotypes |
Hd ± SD | ||
Malawi and Mozambique | 115 | 96 (88) | 0.994 ± 0.003 | 34 (34) | 0.809 ± 0.032 | 42 (39) | 0.935 ± 0.011 | 26 (16) | 0.545 ± 0.011 |
eBL case | 63 | 54 (50) | 0.993 ± 0.005 | 19 (19) | 0.786 ± 0.047 | 28 (27) | 0.928 ± 0.019 | 16 (9) | 0.551 ± 0.075 |
Control | 52 | 47 (45) | 0.996 ± 0.002 | 21 (21) | 0.839 ± 0.040 | 26 (23) | 0.945 ± 0.016 | 14 (9) | 0.544 ± 0.083 |
Tanzania | 55 | 44 (42) | 0.991 ± 0.006 | 21(21) | 0.804 ± 0.054 | 30 (30) | 0.968 ± 0.010 | 11 (9) | 0.362 ± 0.084 |
Ghana | 33 | 31 (29) | 0.996 ± 0.009 | 16 (16) | 0.873 ± 0.048 | 23 (23) | 0.968 ± 0.018 | 8 (7) | 0.472 ± 0.106 |
The numbers of amino acid sequence variations are shown in parenthesis. eBL: endemic Burkitt Lymphoma, Hd: Haplotype diversity, SD: standard deviation