Table 1.
Analysis | Cell types | Datasets |
---|---|---|
Variance analysis |
CD8 T cells Whole blood Simulated mixtures (T, B, and mono) |
|
Sim1_simModel | Simulated mixtures (T, B, and mono) | |
Sim1_libSize | Simulated mixtures (T, B, and mono) | |
Sim2 | 6 gradients of cell types: Comp 5–10 | |
Sim3 | 6 gradients of cell types: Comp 5–10 and one unknown component HCT116 |
Six gradients of cell types:
Comp 5—T, B, monocytes, neutrophils, and NK cells
Comp 6—T, B, monocytes, neutrophils, NK cells, and eosinophils
Comp 7—T, B, monocytes, neutrophils, NK cells, eosinophils, and myeloid DC
Comp 8—T, B, monocytes, neutrophils, NK cells, eosinophils, myeloid DC, and CD34+ HSC
Comp 9—CD4 T, CD8 T, B, monocytes, neutrophils, NK cells, eosinophils, myeloid DC, and CD34+ HSC
Comp 10—CD4 T, CD8 T, naive B, memory B, monocytes, neutrophils, NK cells, eosinophils, myeloid DC, and CD34+ HSC