Table 2.
Origin | # Isolates: Total (SP, RP, C) | Genome Size Range (Mb) | Genetic Cluster(s) | Dates of Collection | Reference(s) |
---|---|---|---|---|---|
UK | 440 (43, 52, 205) | 1.95–2.56 | 1–11, 13–14, 16–18, 20, 22–25, 27–28, 30–33 | 2009–2015 | Weinert et al. (2015); Wileman et al. (2019) |
Canada | 197 (36, 31, 56) | 1.92–2.49 | 1–3, 5–18, 20, 22–26, 29–30 | 1983–2016 | Hadjirin et al. (2020) |
China | 197 (0, 0, 197) | 2.06–2.54 | 1, 3, 5–12, 18–22, 27–30, 32, 34 | 2013–2014 | Zou et al. (2018) |
Vietnam | 190 (149, 0, 32) | 1.97–2.19 | 1 | 2000–2010 | Weinert et al. (2015) |
USA | 16 (3, 4, 0) | 2.02–2.46 | 3, 5, 8–10, 26 | 2016 | Hadjirin et al. (2020) |
Spain | 10 (7, 0, 0) | 2.03–2.42 | 1, 4, 8, 22 | 2016 | Hadjirin et al. (2020) |
Reference Collection | 29 (14, 2, 3) | 1.98–2.30 | 1–4, 6, 8, 13–14, 18–19 | — | NCBI GenBank, http://www.ncbi.nlm.nih.gov/genbank (last accessed 2016) |
Note.—SP, systemic pathogen; RP, respiratory pathogen; C, carriage.