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. Author manuscript; available in PMC: 2021 Apr 14.
Published in final edited form as: J Chem Theory Comput. 2021 Mar 12;17(4):2457–2464. doi: 10.1021/acs.jctc.0c01045

Figure 3.

Figure 3.

Schematic representation of the thermodynamic cycle used to calculate relative binding free energies due to mutation (ΔΔG = ΔG1 – ΔG3). Horizontal arrows indicate the non-physical pathways used in the current study where the amino acid was alchemically morphed from wild-type to its mutant form for both bound and unbound states.