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. Author manuscript; available in PMC: 2021 Oct 1.
Published in final edited form as: Nat Biotechnol. 2020 Nov 30;39(4):472–479. doi: 10.1038/s41587-020-0737-3

Fig. 3 |. Patterns of strong selection in intrahost HiV-1 evolution.

Fig. 3 |

a, Among the top 1% most beneficial variants across individuals, mutations to escape from T cell-mediated immunity are especially common. b, Due to clonal interference between escape mutants, MPL identifies more escape variants to be strongly beneficial than an independent model that ignores genetic linkage. c, In contrast, the independent model estimates an excess in the number of strongly beneficial reversions.