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. 2021 Apr 14;22:266. doi: 10.1186/s12864-021-07461-0

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 3 — According to our database and the matrix A (Table S2), TFs in the early-phase mostly regulated genes that encode for chaperone molecules, cell wall components, and SOS response. a List of TFs in the early-phase and their temporal activities. b The Cytoscape network shows that 65% (13/20) of the regulated genes by the TFs that belonged to the early-phase are associated with cell wall biosynthesis, chaperones production, or DNA repair and SOS response (Table S2)