Table 1.
Potential identities of samples based on the top three rankings sorted by the “Query Cover” and “Ident” functions in GenBank
| Top three rankings of potential identities in GenBank | ||||||||
|---|---|---|---|---|---|---|---|---|
| Sorted with descending order of “Query Cover” | Sorted with descending order of “Ident” | |||||||
| Sample† | Query cover (%) | Identity to sample (%) | Microorganism* | Accession number | Query Cover (%) | Identity to sample (%) | Microorganism* | Accession number |
| WFMax1B (3,902 bp) | 67 | 91 | S. zamani | KU244528.1 | 57 | 93 | S. singaporensis | KU341123.1 |
| 67 | 89 | S. zuoi | KU341120.1 | 32 | 92 | S. sp. ex Morelia viridis | KC201640.1 | |
| 57 | 93 | S. singaporensis | KU341123.1 | 62 | 90 | S. zuoi | KU341121.1 | |
| J1.11 (3,979 bp) | 88 | 96 | S. singaporensis | KU341123.1 | 32 | 99 | S. singaporensis | KY513624.1 |
| 74 | 96 | S. zamani | KU244528.1 | 74 | 96 | S. zamani | KU244528.1 | |
| 73 | 95 | S. zuoi | KU341120.1 | 63 | 96 | S. zuoi | KU341121.1 | |
| C2.5 (4,003 bp) | 84 | 87 | B. besnoiti | DQ227420.1 | 33 | 99 | G. szekelyi | GU479656.1 |
| 66 | 94 | T. gondii | X75453.1 | 32 | 98 | G. koertingi | GU479647.1 | |
| 40 | 94 | H. hammondi | AH008381.2 | 31 | 98 | G. pannonica | GU479642.1 | |
| C2.1 (4,164 bp) | 81 | 88 | B. besnoiti | DQ227420.1 | 31 | 98 | G. janae | GU479644.1 |
| 75 | 94 | T. gondii | X75453.1 | 30 | 98 | G. pannonica | GU479642.1 | |
| 36 | 94 | I. belli | DQ060661.2 | 30 | 98 | G. koertingi | GU479647.1 | |
| C1.9 (4,053 bp) | 80 | 88 | B. besnoiti | DQ227420.1 | 28 | 98 | G. pannonica | GU479642.1 |
| 73 | 94 | T. gondii | X75453.1 | 28 | 97 | G. janae | GU479644.1 | |
| 34 | 94 | I. belli | DQ060661.2 | 28 | 97 | G. koertingi | GU479647.1 | |
* Genus names: B = Besnoitia; G = Goussia; H = Hammondia; I = Isospora; S = Sarcocystis; T = Toxoplasma.
Sequence of WFMax1B was produced from nested PCR of purified primary PCR; J1.11 from Lucigen cloning (nested PCR); C2.5, C2.1, and C1.9 from NEB cloning (Re-PCR).