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. 2021 Jan 23;217(3):iyab002. doi: 10.1093/genetics/iyab002

Table 2.

Method robustness measured in stability of inference by model and prior setting

Setting (abbreviation) Stability
Phenotype selection 1.00
Add. tree expert (A-tree*) 1.00
Add. tree default (A-tree) 0.99
Add. maximum likelihood (A-ML) 0.99
Non-add. tree expert (ADX-tree*) 0.98
Add. + dom. tree expert (AD-tree*) 0.97
Add. comp. expert (A-comp*) 0.94
Add. + dom. maximum likelihood (AD-ML) 0.88
Add. comp. default (A-comp) 0.86
Non-add. tree expert opposite (ADX-tree-opp*) 0.86
Non-add. comp. expert (ADX-comp*) 0.80
Non-add. maximum likelihood (ADX-ML) 0.79
Add. + dom. comp. expert (AD-comp*) 0.69
Add. + dom. tree default (AD-tree) 0.51
Non-add. tree default (ADX-tree) 0.23
Add. + dom. comp. default (AD-comp) 0.13
Non-add. comp. default (ADX-comp) 0.04
a

As a proportion of analyses with less than 1% divergences for the Bayesian approach and as a proportion of analyses with convergence for the ML approach.