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. 2021 Apr 2;15(4):e0009304. doi: 10.1371/journal.pntd.0009304

Table 2. Primers used for qRT-PCR analysis of TLRs.

Gene Genbank number Primer sequence (5’to 3’) Product size (bp) Primer length (nt) Cross intron length (nt) Primer site
TLR1 NC_000071 AGTCAGCCTCAAGCATTTGG 115 20 0 6716. . .6735
TACCCGAGAACCGCTCAAC 19 6830…6812
TLR2 NC_000069 CGCTCCAGGTCTTTCACCTC 101 20 0 3165…3184
AGGTCACCATGGCCAATGTA 20 3265…3246
TLR3 NC_000074 CGCAGTTCAGCAAGCTATTG 103 20 0 13950…13969
TCTTCGCAAACAGAGTGCAT 20 14052…14033
TLR4 NC_000070 ACTGTTCTTCTCCTGCCTGACA 99 22 5974 323…344
GGACTTTGCTGAGTTTCTGATCC 23 6395…6373
TLR5 NC_000067 GGATGCTGAGTTCCCCCAC 134 19 700 17686…17704
AAAGGCTATCCTGCCGTCTG 20 18519…18500
TLR6 NC_000071 TCCGACAACTGGATCTGCTC 101 20 0 15886…15905
AAGACTTTCTGTTTCCCCGC 20 15986…15967
TLR7 NC_000086 CCGTTGAGAGAGTTGCGGTA 187 20 0 23707…23726
TGAGTTTGTCCAGAAGCCGTA 21 23893…23873
TLR8 NC_000086 CTGACGTGCTTTTGTCTGCTG 101 21 0 18508…18528
AGGGAGTTGTGCCTTATCTCGT 22 18608…18587
TLR9 NC_000075 CTGCCCAAACTCCACACTCT 100 20 0 2082. . .2101
ACAAGTCCACAAAGCGAAGG 20 2181…2162
TLR11 NC_000080 TTGGGATTGGAAATGACAGG 173 20 0 5104…5123
CAACAGCAGGAGATGAGTGG 20 5276…5257
TLR12 NC_000070 TAACTGGGTGGAGCACTTCC 143 20 0 214…233
CAAGGTCTGTGTCAGGTTGC 20 356…337
TLR13 NC_000086 AAAGACACGGGATTCAGGTTG 102 21 0 15192…15212
GGTGGTCCAGGAATACAGAGG 21 15293…15273