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. 2021 Apr 1;11:652432. doi: 10.3389/fcimb.2021.652432

Table 2.

Sequences of the primers used for the construction of mutants and expression vectors.

Primer Sequence (5′ to 3′)
Used for gene deletion
vscF-1 CAGGTCGACTCTAGAGGATCCGGGTTATCGCATATCCAG
vscF-2 CGTTCCATGCACTGTTGGTCGCATCGTA
vscF-3 GACCAACAGTGCATGGAACGAGAATTAC
vscF-4 CGAGCTCGGTACCCGGGGATCCTTCCTAATGTCTTGGGTG
vpa0226-1 CAGGTCGACTCTAGAGGATCCTGACCGTGATGCCAAAAT
vpa0226-2 AGCCGTGTCTGCGATACCAACAGCGAAC
vpa0226-3 TTGGTATCGCAGACACGGCTTCTGAGTT
vpa0226-4 CGAGCTCGGTACCCGGGGATCCAATGCCTTGTCGGCACGA
Used for the construction of complementation strains
C-vscF-1 CAGGTCGACTCTAGAGGATCCGGGTTATCGCATATCCAG
C-vscF-2 CGAGGTTTACACTGTTGGTCGCATCATA
C-vscF-3 GACCAACAGTGTAAACCTCGATGACGTTAA
C-vscF-4 CGAGCTCGGTACCCGGGGATCCTTCCTAATGTCTTGGGTG
S151A-1 CAGGTCGACTCTAGAGGATCCGGGATGATGAAAAAAACAATCACAC
S151A-2 GTATCAGACAATGCGTCACCGAGTGCAACC
S151A-3 GGTGACGCATTGTCTGATACAGGCAACATC
S151A-4 CGAGCTCGGTACCCGGGGATCCAATGCCTTGTCGGCACGAGA
Used for the construction of expression vectors
pM207-vp1683CyaA1 GAGCTCGGTACCCGGGGATCCCATGGTTAATATCAATACGTC
pM207-vp1683CyaA2 GCGATTGCTGACCAAGTTTGTGGCTAT
pM207-vp1683CyaA3 CAAACTTGGTCAGCAATCGCATCAGGCTGG
pM207-vp1683CyaA4 CAGGTCGACTCTAGAGGATCCTTATGTCATAGCCGGAATCC
pM207-vp1686CyaA1 GAGCTCGGTACCCGGGGATCCCATGATCAGTTTTGGAAATGT
pM207-vp1686CyaA2 GCGATTGCTGTTTGATACCGTGAAGGCTAT
pM207-vp1686CyaA3 CGGTATCAAACAGCAATCGCATCAGGCTGG
pM207-vp1686CyaA4 CAGGTCGACTCTAGAGGATCCTTATGTCATA GCCGGAATCC
pM207-vpa0226CyaA1 GAGCTCGGTACCCGGGGATCCCATGATGAAAAAAACAATCAC
pM207-vpa0226CyaA2 GCGATTGCTGGAAACGGTACTCGGCTAAGT
pM207-vpa0226CyaA3 GTACCGTTTCCAGCAATCGCATCAGGCTGG
pM207-vpa0226CyaA4 CAGGTCGACTCTAGAGGATCCTTATGTCATA GCCGGAATCC
Used for qRT-PCR
16sRNA-F GACACGGTCCAGACTCCTAC
16sRNA-R GGTGCTTCTTCTGTCGCTAAC
vpa0226RT-F CAAACCAGCAAACACCTT
vpa0226RT-R GTCCGTCAAACGAATCAG

Underscore served as indicate vector upstream or downstream sequence.