Table 2.
Primer | Sequence (5′ to 3′) |
---|---|
Used for gene deletion | |
vscF-1 | CAGGTCGACTCTAGAGGATCCGGGTTATCGCATATCCAG |
vscF-2 | CGTTCCATGCACTGTTGGTCGCATCGTA |
vscF-3 | GACCAACAGTGCATGGAACGAGAATTAC |
vscF-4 | CGAGCTCGGTACCCGGGGATCCTTCCTAATGTCTTGGGTG |
vpa0226-1 | CAGGTCGACTCTAGAGGATCCTGACCGTGATGCCAAAAT |
vpa0226-2 | AGCCGTGTCTGCGATACCAACAGCGAAC |
vpa0226-3 | TTGGTATCGCAGACACGGCTTCTGAGTT |
vpa0226-4 | CGAGCTCGGTACCCGGGGATCCAATGCCTTGTCGGCACGA |
Used for the construction of complementation strains | |
C-vscF-1 | CAGGTCGACTCTAGAGGATCCGGGTTATCGCATATCCAG |
C-vscF-2 | CGAGGTTTACACTGTTGGTCGCATCATA |
C-vscF-3 | GACCAACAGTGTAAACCTCGATGACGTTAA |
C-vscF-4 | CGAGCTCGGTACCCGGGGATCCTTCCTAATGTCTTGGGTG |
S151A-1 | CAGGTCGACTCTAGAGGATCCGGGATGATGAAAAAAACAATCACAC |
S151A-2 | GTATCAGACAATGCGTCACCGAGTGCAACC |
S151A-3 | GGTGACGCATTGTCTGATACAGGCAACATC |
S151A-4 | CGAGCTCGGTACCCGGGGATCCAATGCCTTGTCGGCACGAGA |
Used for the construction of expression vectors | |
pM207-vp1683CyaA1 | GAGCTCGGTACCCGGGGATCCCATGGTTAATATCAATACGTC |
pM207-vp1683CyaA2 | GCGATTGCTGACCAAGTTTGTGGCTAT |
pM207-vp1683CyaA3 | CAAACTTGGTCAGCAATCGCATCAGGCTGG |
pM207-vp1683CyaA4 | CAGGTCGACTCTAGAGGATCCTTATGTCATAGCCGGAATCC |
pM207-vp1686CyaA1 | GAGCTCGGTACCCGGGGATCCCATGATCAGTTTTGGAAATGT |
pM207-vp1686CyaA2 | GCGATTGCTGTTTGATACCGTGAAGGCTAT |
pM207-vp1686CyaA3 | CGGTATCAAACAGCAATCGCATCAGGCTGG |
pM207-vp1686CyaA4 | CAGGTCGACTCTAGAGGATCCTTATGTCATA GCCGGAATCC |
pM207-vpa0226CyaA1 | GAGCTCGGTACCCGGGGATCCCATGATGAAAAAAACAATCAC |
pM207-vpa0226CyaA2 | GCGATTGCTGGAAACGGTACTCGGCTAAGT |
pM207-vpa0226CyaA3 | GTACCGTTTCCAGCAATCGCATCAGGCTGG |
pM207-vpa0226CyaA4 | CAGGTCGACTCTAGAGGATCCTTATGTCATA GCCGGAATCC |
Used for qRT-PCR | |
16sRNA-F | GACACGGTCCAGACTCCTAC |
16sRNA-R | GGTGCTTCTTCTGTCGCTAAC |
vpa0226RT-F | CAAACCAGCAAACACCTT |
vpa0226RT-R | GTCCGTCAAACGAATCAG |
Underscore served as indicate vector upstream or downstream sequence.