Table 3.
Pathogens co-detected by mNGS in both BALF and blood samples
| Patient ID | Pathogens | Reads (BALF) | Reads (Blood) |
|---|---|---|---|
| 2 | Acinetobacter baumannii | 2782 | 68 |
| 5 | Pneumocystis jirovecii | 69 | 6 |
| 28 | Stenotrophomonas maltophilia | 543 | 10 |
| Aspergillus fumigatus | 19 | 10 | |
| 31 | Pneumocystis jirovecii | 140 | 1 |
| 39 | Staphylococcus aureus | 134 | 400 |
| 44 | Pneumocystis jirovecii | 281 | 288 |
| 58 | Nocardia cyriacigeorgica | 114 | 8 |
| 75 | Pneumocystis jirovecii | 1552 | 4 |
| 77 | Cytomegalovirus | 20,352 | 28,100 |
| Epstein-Barr virus | 1610 | 102 | |
| Torque teno virus | 24 | 85 | |
| 86 | Legionella pneumophila | 8865 | 2234 |
| 97 | Acinetobacter baumannii | 239,490 | 22 |