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Schematic overview of the data analysis using ComPrAn. The data flow (middle), with input (left) and output (right) of each step performed for peptide and normalized protein data inputs. Peptide-to-protein part of the workflow does not need to be performed each time a new visualization/clustering is done; normalized protein data can be used as a direct input in the “protein workflow” (red arrow). GUI = graphical user interface, PD = Proteome Discoverer™.
