Table 1.
Overview of studies providing evidence on changes in DNA methylation associated with risk SNPs for common psychiatric disorders.
Type of association between risk SNP and DNA methylation | Phenotype | Tissue | Developmental stage | Size | DNA methylation quantification method | Study describing the association |
---|---|---|---|---|---|---|
mQTL | Schizophrenia | Dorsolateral prefrontal cortex | Adult | N = 216 | 27K methylation array | (87) |
Fetal brain | Prenatal | N = 166 | 450K methylation array | (88) | ||
Blood | Adult | N = 639 | 450K methylation array | (49) | ||
Prefrontal cortex, blood, saliva | Adolescent, adult | N = 1,292 | EPIC methylation array, 450K methylation array | (89) | ||
Bipolar disorder | Cerebellum | Adult | N = 153 | 27K methylation array | (90) | |
Blood | Adult | N = 725 | iPLEX | (92) | ||
Major depression | Blood | Adult | N = 3,284 | 450K methylation array | (16) | |
Blood | Adult | N = 742 | 450K methylation array | (93) | ||
Autism | Blood | Child | N = 968 | 450K methylation array | (97) | |
Blood | Neonatal, child | N = 1,257 | 450K methylation array | (65) | ||
Autism, attention-deficit/hyperactivity disorder, autism | Fetal brain, brain cortical tissue, blood | Prenatal, adult | N = 2,353 | 450K methylation array, EPIC methylation array | (94) | |
Attention-deficit/hyperactivity disorder | Saliva | Child | N = 611 | EPIC methylation array | (98) | |
Schizophrenia, bipolar disorder, major depression, autism, attention-deficit/hyperactivity disorder | Fetal brain, brain cortical tissue | Prenatal, adult | N = 1,178 | 450K methylation array | (96) | |
Alcohol dependence disorder | Prefrontal cortex | Adult | N = 48 | 450K methylation array | (95) | |
CpG-SNP | Major depression | Blood | Adult | N = 1,132 | MBD-seq | (99) |
Schizophrenia | Blood, Broadman area 10 | Adult | N = 1,474 | MBD-seq | (100) | |
Alcohol dependence disorder | Dorsolateral prefrontal cortex | Adult | N = 28 | Pyrosequencing | (101) |
mQTL, methylation Quantitative Trait Locus; SNP, single-nucleotide polymorphism.