Table 5.
Sizes of CAZyme module classes identified from the predicted proteomes of nectriaceous fungi
| Species | CBM | CE | GH | GT | PL | AA | Total | Secreteda | RF (%)b |
|---|---|---|---|---|---|---|---|---|---|
| Neonectria faginata | 47 | 100 | 324 | 141 | 33 | 112 | 757 | 251 | 5.82 |
| Neonectria coccinea | 42 | 95 | 317 | 147 | 32 | 122 | 755 | 251 | 5.83 |
| Neonectria ditissima | 54 | 111 | 342 | 136 | 32 | 121 | 796 | 257 | 5.82 |
| Corinectria fuckeliana | 39 | 77 | 263 | 141 | 22 | 85 | 627 | 207 | 5.47 |
| Thelonectria rubi | 53 | 91 | 275 | 130 | 26 | 98 | 673 | 238 | 5.18 |
Number of CAZyme modules with positive signal peptide prediction.
Relative frequency of CAZyme modules over the total number of predicted proteins.
CMB, carbohydrate-binding modules; CE, carbohydrate esterases; GH, glycoside hydrolases; GT, glycosyl transferases; PL, polysaccharide lyases; AA, auxiliary enzymes.