Table 1.
Selected geometric parameters | 6XB9 | Fe(III) 3HPA2− | Fe(III) 3HPA1− | Fe(III) 3MPA | Fe(II) 3HPA2− | Fe(II) 3HPA1− | Fe(II) 3MPA |
---|---|---|---|---|---|---|---|
RMSDa | - | 0.382 | 0.248 | 0.417 | 0.517 | 0.357 | 0.547 |
Distance (Å) | |||||||
Fe-O/S distance (Å) | 2.16 | 1.87 | 2.23 | 2.32 | 1.91 | 2.26 | 2.33 |
Fe-O(carb)b (Å) | 2.17 | 2.14 | 1.97 | 2.08 | 2.55 | 2.25 | 2.51 |
Fe-Cl (Å) | 2.36 | 2.36 | 2.28 | 2.36 | 2.60 | 2.38 | 2.47 |
Fe-His(Ave) | 2.16 | 2.18 | 2.13 | 2.20 | 2.17 | 2.15 | 2.19 |
Fe-H90 | 2.15 | 2.17 | 2.17 | 2.19 | 2.18 | 2.16 | 2.20 |
Fe-H92 | 2.16 | 2.20 | 2.08 | 2.21 | 2.18 | 2.11 | 2.22 |
Fe-H142 | 2.16 | 2.17 | 2.13 | 2.19 | 2.16 | 2.19 | 2.15 |
Angles (°) | |||||||
Fe-O/S-Cα | 92.5 | 120.6 | 113.0 | 96.7 | 117.7 | 111.6 | 98.4 |
H90-Fe-Cl | 175.7 | 171.8 | 174.0 | 169.3 | 169.6 | 171.5 | 166.3 |
H92-Fe-O/S | 171.1 | 177.9 | 174.1 | 171.9 | 168.2 | 179.3 | 175.9 |
O(carb)-Fe-O/S | 101.1 | 92.1 | 85.1 | 96.4 | 82.6 | 88.6 | 88.8 |
3HPA/3MPA C1-C2-C3 | 114.6 | 116.9 | 115.6 | 119.3 | 116.5 | 117.8 | 117.6 |
The 3HPA-inhibitor was modeled as both the protonated and deprotonated alcohol (3HPA1− and 3HPA2−) for comparison.
Hydrogens and all constrained atoms were excluded from RMSD calculations.
Fe-O(carb) designates the distance separating the Fe(III)-site from the 3HPA (or 3MPA) carboxylate O-atom.