Table 3.
Accuracy measures of genomic studies for the systematic review.a
| Study, year | Model basisb | Predictor | Patients, n | Total sample (PCa+, PCa-)c | Crossvald/ split/none | TP,e n | FN,f n | FP,g n | TN,h n | Seni
(lower-upper) |
Spej
(lower-upper) |
| Donovan, 2015 [62] | PB | Urine | 195 | 195 (89, 106) | None | 80 | 9 | 84 | 22 | 0.899 (0.817-0.947) |
0.208 (0.141-0.295) |
| Roberts, 2015 [16] | PB | Semen | 66 | 66 (12, 54) | Crossval | 11 | 1 | 32 | 20 | 0.917 (0.587-0.988) |
0.385 (0.263-0.522) |
| Zhang, 2015 [63] | PB | Serum | 580 | 580 (180, 400) | 320 (120, 200) | 84 | 36 | 5 | 195 | 0.7 (0.612-0.775) |
0.975 (0.941-0.99) |
| Mengual, 2016 [64] | PB | Urine | 224 | 224 (15, 73) | Crossval | 116 | 35 | 12 | 61 | 0.768 (0.694-0.829) |
0.836 (0.732-0.904) |
| Salido-Guadarrama, 2016 [15] | PB | Urine | 143 | 143 (73, 70) | None | 60 | 13 | 13 | 57 | 0.822 (0.717-0.894) |
0.814 (0.706-0.889) |
| Dereziński, 2017 [17] | PB | Serum | 89 | 89 (49, 40) | 34 (19, 15) | 13 | 6 | 0 | 15 | 0.675 (0.449-0.841) |
0.969 (0.65-0.998) |
| Dereziński, 2017a [17] | PB | Urine | 89 | 89 (49, 40) | 34 (19,15) | 17 | 2 | 4 | 11 | 0.895 (0.663-0.974) |
0.733 (0.467-0.896) |
| Kirby, 2017 [60] | LB | Tissue | 101 | 398 (286, 112) | 262 (213, 49) | 180 | 33 | 4 | 45 | 0.845 (0.79-0.888) |
0.918 (0.802-0.969) |
| Barceló, 2018 [65] | PB | Semen | 42 | 42 (34, 18) | None | 22 | 2 | 5 | 13 | 0.917 (0.721-0.979) |
0.722 (0.481-0.879) |
| Amante, 2019 [66] | PB | Urine | 91 | 91 (43, 48) | Crossval | 40 | 3 | 5 | 43 | 0.93 (0.805-0.977) |
0.896 (0.773-0.956) |
| Brikun, 2019 [67] | PB | Urine | 94 | 94 (42, 52) | 29 (13, 16) | 12 | 1 | 5 | 11 | 0.923 (0.609-0.989) |
0.687 (0.433-0.864) |
| Gao, 2019 [69] | PB | Urine | 183 | 183 (108, 75) | 77 (55, 22) | 48 | 7 | 5 | 17 | 0.873 (0.756-0.938) |
0.773 (0.556-0.902) |
| Patel, 2019 [61] | LB | Tissue | 699 | 795 (699, 96) | 242 (212, 30) | 199 | 13 | 2 | 28 | 0.939 (0.897-0.964) |
0.933 (0.769-0.983) |
| Santotoribio, 2019 [68] | PB | Serum | 232 | 232 (32, 200) | None | 30 | 2 | 58 | 142 | 0.937 (0.782-0.984) |
0.71 (0.643-0.769) |
aAll studies employed regression-based models.
bLB: lesion-based model; PB: patient-based model.
cPCa: prostate cancer.
dCrossval: cross-validation techniques.
eTP: true-positive.
fFN: false-negative.
gFP: false-positive.
hTN: true-negative.
iSen: sensitivity.
jSpe: specificity.