Table 1. Epidemiological data for the sequenced samples.
ID | Sample type | Date onset symptoms | Collection date | Age | Sex | State | Municipality | Ct value | Reads | Coverage (%) | Acession Number |
---|---|---|---|---|---|---|---|---|---|---|---|
CB08 | Serum | 2018-02-23 | 2018-02-23 | 33 | F | MT | Cuiaba | 18,59 | 900 | 43,70 | MN428504 |
CB04 | Serum | 2018-05-18 | 2018-05-21 | 22 | F | MT | Cuiaba | 30,98 | 4318 | 52,60 | MN428505 |
CB09 | Serum | 2018-01-29 | 2018-02-01 | 23 | F | MT | Cuiaba | 19,66 | 291904 | 93,60 | MN428506 |
CB10 | Serum | 2018-07-03 | 2018-07-05 | 29 | F | MT | Cuiaba | 26,88 | 620828 | 82,70 | MN428507 |
CB12 | Serum | 2018-04-25 | 2018-04-27 | 22 | F | MT | Cuiaba | 30,65 | 175360 | 78,60 | MN428508 |
CB17 | Serum | 2018-03-11 | 2018-03-13 | 27 | M | MT | Cuiaba | 22,16 | 99926 | 83,90 | MN428509 |
CB18 | Serum | 2018-04-24 | 2018-04-25 | 43 | M | MT | Cuiaba | 27,38 | 554552 | 79,90 | MN428510 |
CB16 | Serum | 2018-04-12 | 2018-04-18 | 31 | F | MT | Cuiaba | 19,87 | 577642 | 85,10 | MN428511 |
CB22 | Serum | 2018-03-10 | 2018-03-13 | 26 | M | MT | Cuiaba | 28,33 | 147381 | 88,50 | MN428512 |
CB19 | Serum | 2018-04-05 | 2018-04-26 | 37 | F | MT | Cuiaba | 24,93 | 514308 | 82,70 | MN428513 |
CB23 | Serum | 2018-03-13 | 2018-03-13 | 30 | F | MT | Cuiaba | 23,62 | 278973 | 53,00 | MN428514 |
CB24 | Serum | 2018-03-18 | 2018-03-20 | 62 | F | MT | Cuiaba | 20,31 | 235010 | 93,50 | MN428515 |
CB26 | Serum | 2018-03-21 | 2018-03-23 | 22 | F | MT | Cuiaba | 24,08 | 4167 | 86,50 | MN428516 |
CB27 | Serum | 2018-03-15 | 2018-03-17 | 40 | F | MT | Cuiaba | 29,33 | 6855 | 84,10 | MN428517 |
CB28 | Serum | 2018-03-07 | 2018-03-08 | 19 | F | MT | Cuiaba | 20,07 | 4391 | 89,40 | MN428518 |
CB29 | Serum | 2018-03-15 | 2018-03-16 | 20 | F | MT | Cuiaba | 20,96 | 6384 | 88,20 | MN428519 |
CB31 | Serum | 2018-03-08 | 2018-03-09 | 31 | F | MT | Cuiaba | 29,22 | 7537 | 85,20 | MN428520 |
CB32 | Serum | 2018-03-16 | 2018-03-16 | 29 | F | MT | Cuiaba | 21,22 | 6010 | 87,10 | MN428521 |
CB30 | Serum | 2018-03-07 | 2018-03-08 | 24 | F | MT | Cuiaba | 31,21 | 9104 | 83,50 | MN428522 |
CB33 | Serum | 2018-03-08 | 2018-03-08 | 31 | F | MT | Cuiaba | 22,16 | 4753 | 89,40 | MN428523 |
CB34 | Serum | 2018-03-05 | 2018-03-06 | 34 | F | MT | Cuiaba | 22,25 | 6554 | 86,50 | MN428524 |
CB35 | Serum | 2018-03-05 | 2018-03-06 | 24 | F | MT | Cuiaba | 25,24 | 4454 | 89,40 | MN428525 |
CB36 | Serum | 2018-03-06 | 2018-03-06 | 16 | F | MT | Cuiaba | 21,42 | 8795 | 86,40 | MN428526 |
CB37 | Serum | 2018-03-05 | 2018-03-06 | 23 | F | MT | Cuiaba | 26,95 | 3957 | 89,40 | MN428527 |
Ct = RT-qPCR quantification cycle threshold value.