Table 6.
The number of detected chromosomal breakpoints in t(X;21;19;4) with the different sequencing technologies
| Illumina PE (TIDDIT) | Nanopore (sniffles) | Optical mapping (bionano access) | Linked reads (Longranger) | |
|---|---|---|---|---|
| Illumina PE (TIDDIT) | 119 (5084) | – | – | – |
| Nanopore (sniffles) | 130 | 120 (14,730) | – | – |
| Optical mapping (bionano access) | 119 | 120 | 19 (12,057) | – |
| 10 × chromium (Longranger) | 130 | 124 | 88 | 87 (1983) |
The table presents the number of gold-standard breakpoints detected for each separate technology, as well as each pairwise combination. The numbers within parenthesis illustrate the total number of calls