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. 2020 Dec 10;42(3):369–377. doi: 10.1093/carcin/bgaa132

Table 4.

Assessment of gene-level associations with risk of BE using GWAS meta-analysis data via application of MAGMA

Gene Chr SNPsa P valueb FDR qc
1 GHR 5 882 0.0097 0.071
2 IGFBP3 7 37 0.0135 0.071
3 IGF1R 15 1226 0.0176 0.071
4 GH1 17 27 0.09 0.26
5 IGFBP1 7 29 0.11 0.27
6 IGFBP4 17 51 0.22 0.44
7 IGF2 11 84 0.48 0.72
8 IGFBP5 2 87 0.48 0.72
9 IGF1 12 223 0.70 0.88
10 IGFBP6 12 18 0.83 0.88
11 IGFALS 16 58 0.87 0.88
12 IGFBP2 2 99 0.88 0.88

aNumber of SNPs per gene.

bGene-level P value.

cFalse discovery rate q value.