Table 1.
Nm in Arabidopsis cytoplasmic rRNAs and assigned C/D guide snoRNAs
18S rRNA | 25S rRNA | ||||
A28 | aU27 | U44 | SnoR120 | G2289 | aU15 |
C38 | SnoR66 | U48 | aSnoR16 | C2294 | SnoR131-133 |
U123 | SnoR116 | U144 | SnoR36 | A2322 | U30 |
A162 | aSnoR18 | G399 | SnoR65 | A2327 | aSnoR44 |
U213 | SnoR65, SnoR146 | A661 | aU18 | C2338 | aSnoR44 |
G246 | SnoR124 | C675 | aSnoR58Y | A2362 | SnoR43.12 |
G392 | SnoR30 | U676 | cSnoR58Y | C2366 | aSnoR37 |
C418 | aU14 | U803 | aSnoR14 | G2392 | aSnoR29 |
A440 | SnoR15,U16 | G814 | aSnoR39BY | G2396 | aSnoR28 |
A468 | SnoR17 | A816 | aU51 | G2410 | aSnoR29 |
C473 | aSnoR7 | A826 | aU80 | U2411 | cSnoR29 |
A545 | SnoR41Y | A885 | aSnoR72Y | U2422 | aSnoR37 |
U582 | aSnoR77Y | G917 | aU80 | U2456 | SnoR16.1 |
G599 | U54 | A945 | aSnoR12 | U2494 | aSnoR123 |
U604 | aSnoR115 | U1067 | SnoR41Y | G2620 | SnoR35, aU31 |
U615 | aSnoR13 | A1143 | aU38 | A2641 | SnoR27, SnoR68Y |
A623 | U36 | A1263 | aSnoR22 | U2651 | aSnoR10 |
A780 | SnoR119 | U1278 | aSnoR22 | G2652 | cSnoR10 |
A796 | SnoR25 | A1377 | aSnoR7 | C2683 | SnoR148 |
A801 | SnoR53Y | C1447 | aU24 | U2736 | SnoR68 |
A978 | aSnoR59 | A1459 | aU24 | G2792 | aSnoR1 |
U1013 | SnoR20.1 | G1460 | cU24 | G2794 | dSnoR1 |
C1219 | SnoR166 | C1479 | SnoR147 | G2816 | aSnoR38Y |
U1235 | aSnoR14 | C1518 | aU49, SnoR121 | C2837 | aSnoR24 |
U1264 | aSnoR8, SnoR67 | C1847 | SnoR128-129 | C2880 | aU49 |
U1266 | aSnoR32 | C1850 | SnoR149 | U2884 | SnoR64 |
U1273 | aU33, SnoR34 | G1855 | aSnoR59 | A2912 | SnoR31 |
G1275 | aSnoR21 | C1860 | SnoR15,U55 | G2918 | SnoR34, SnoR6.3 |
A1330 | aSnoR32 | U1892 | aU34 | U2922 | |
U1384 | U61.1 | U2114 | SnoR117 | G2923 | By Spb1 in yeast |
G1434 | aSnoR19 | G2125 | aU60 | A2935 | aSnoR18 |
U1448 | aSnoR19 | A2127 | aSnoR12 | A2947 | U29 |
A1579 | aSnoR8 | C2198 | SnoR118 | C2949 | SnoR69Y |
C1645 | aU43 | A2215 | U37 | C2960 | U35 |
A1758 | aSnoR23 | A2221 | aU36 | G3292 | aU33 |
5.8S rRNA | G2237 | aU36 | U3301 | aSnoR13 | |
A47 | aSnoR9 | A2257 | aU40 | ||
G79 | aSnoR39BY | A2282 | aU15 |
aMultiple gene variants are not shown.
bUnderlined are the novel methylation sites that were not previously predicted or detected.
cValidated non-canonical targeting.
dPredicted non-canonical targeting.