Fig. 2. CPA-seq reveals sRNAs with diverse termini.
a Distribution of different types of sRNAs extracted from HEK293T cells that we process with the full CPA-seq process or with various combinations of the Cap-Clip, T4 PNK, and AlkB mix enzymes (n = 2). b The number of sRNA species revealed with different treatments (n = 2). c Distribution of different types of sRNAs responsive to T4 PNK treatment (unique reads that were highly detected in CPA group, but lowly detected in CA group with the fold change > 30, n = 2). d Reads of sRNA responsive to T4 PNK treatment mapping to 5S, 18S, and 28S ribosomal RNAs have been combined to show detection of rsRNAs containing diverse termini (rsRNAs with RPM > 300 are shown in the structural map). e Reads of sRNA responsive to T4 PNK treatment mapping to cytosolic tsRNAs have been combined to show detection of tsRNAs containing diverse termini. f Reads of tsRNAs responsive to T4 PNK treatment. g Northern blotting of GluCTC 5′tsRNAs that are responsive to T4 PNK treatment.
