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. Author manuscript; available in PMC: 2021 Apr 19.
Published in final edited form as: Mol Cell. 2017 Jun 1;66(5):672–683.e4. doi: 10.1016/j.molcel.2017.05.016

KEY RESOURCES TABLE.

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Polyclonal anti-HspQ This study N/A
Polyclonal anti-DnaA (Sutton and Kaguni, 1995) PMID: 7592447
Goat anti-Rabbit IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa 680 Invitrogen A-21076
Bacterial Strains
Y. pestis KIM5–3001 (parent) (Jackson et al., 2004) PMID: 15554975
Y. pestis KIM5–3001 Δlon (Jackson et al., 2004) PMID: 15554975
dnaA508 tnaA::Tn10 (Hinds and Sandler, 2004) PMID: 15588282
dnaA508 tnaA::Tn10 lon::kan This study N/A
BL21(DE3) Star™ Invitrogen C601003
Chemicals, Peptides, and Recombinant Proteins
NADH, disodium salt Roche 10107735001
Pyruvate Kinase from rabbit muscle Sigma P9136
Lactate Dehygrogenase, from rabbit muscle Calbiochem 427217
Creatine Kinase from rabbit muscle Roche 10736988001
Adenosine-5′triphosphate (ATP) Roche 10127531001
Creatine Phosphate Roche 10621722001
Phosphoenolpyruvate potassium salt Bachem 4014027.0005
Oligonucleotides
hspQYP105 (Forward): 5′-gagcatatgatcgccagcaaattcggtatag-3′
hspQYP105 (Reverse): 5′-caggagctcttagttacgtaggtgcggagcc-3′
This study N/A
ymoA (Forward): 5′-tgtacatatgacaaaaactgactacc-3′
ymoA (Reverse): 5′-agaggatccttatttcacatgttgccatac-3′
This study N/A
y2853 (Forward): 5′-tacttccaatccaatgcaatggattcactcatcgtccctg-3′
y2853 (Reverse): 5′ttatccacttccaatgttattaatgaatgatggggtaagaggtgg-3′
This study N/A
hspQEC (Forward): 5′-gtgcatatgattgccagcaaattcggtatc-3′
hspQEC (Reverse): 5′-gttgagctcttagttacgcagacgcgggg-3′
This study N/A
hspQ95 (Top): 5′-gatgaactggcggcctcgattcgctaacagttacaggctccgcacctacg-3′
hspQ95 (Bottom): 5′-cgtaggtgcggagcctgtaactgttagcgaatcgaggccgccagttcatc-3’
This study N/A
hspQDD (Top): 5′-ccagttacaggctccgcacctagatgactaagagctccgtcgacaagc-3′
hspQDD (Bottom): 5′-gcttgtcgacggagctcttagtcatctaggtgcggagcctgtaactgg-3
This study N/A
hspQK5D (Top): 5′-ggcagccatatgatcgccagcgatttcggtataggccagcagg-3′
hspQK5D (Bottom): 5′-cctgctggcctataccgaaatcgctggcgatcatatggctgcc-3′
This study N/A
hspQK5E (Top): 5′-ggcagccatatgatcgccagcgaattcggtataggccagcagg-3′
hspQK5E (Bottom): 5′-cctgctggcctataccgaattcgctggcgatcatatggctgcc-3′
This study N/A
hspQK5R (Top): 5′-ggcagccatatgatcgccagccgtttcggtataggccagcagg-3′
hspQK5R (Bottom): 5′-cctgctggcctataccgaaacggctggcgatcatatggctgcc-3′
This study N/A
hspQD25N (Top): 5′-cgggtatttgggagtggtgattaatatcgatcctgaatattctcttgc-3′
hspQD25N (Bottom): 5′-gcaagagaatattcaggatcgatattaatcaccactcccaaatacccg-3′
This study N/A
hspQD27N (Top): 5′-gggagtggtgattgatatcaatcctgaatattctcttgcacc-3′
hspQD27N (Bottom): 5′-ggtgcaagagaatattcaggattgatatcaatcaccactccc-3′
This study N/A
hspQS93A (Top): 5′-ccttcattagatgaactggcggccgcgattcgccaccagttacaggctcc-3′
hspQS93A(Bottom): 5′-ggagcctgtaactggtggcgaatcgcggccgccagttcatctaatgaagg-3′
This study N/A
hspQRHQ/AAA (Top): 5′-gatgaactggcggcctcgattgccgccgcgttac-3′
hspQRHQ/AAA (Bottom): 3′-gttacgtaggtgcggagcctgtaacgcggcggcaatc-5′
This study N/A
hspQext (Top): 5′-caaccttcattagatgaactggcggcctcgattcgcggcagcaccggcagcaccggcagc-3′
hspQext (Bottom): 3′-ctcttagttacgtaggtgcggagcctgtaactggtggctgccggtgctgccggtgctgcc-5′
This study N/A
Recombinant DNA
pET28b-hspQEC This study N/A
pET28b-hspQYP This study N/A
pET28b-hspQ95 This study N/A
pET28b-hspQDD This study N/A
pET28b- hspQK5D This study N/A
pET28b- hspQK5E This study N/A
pET28b- hspQK5R This study N/A
pET28b- hspQD25N This study N/A
pET28b- hspQD27N This study N/A
pET28b- hspQS93A This study N/A
pET28b- hspQRHQ/AAA This study N/A
pET28b- hspQext This study N/A
pET28b-ymoA This study N/A
pET28b-lonYP This study N/A
pET28b-lonEC This study N/A
2BT- hspQY10 This study N/A
2BT- hspQY20 This study N/A
2BT-y2853 This study N/A
2BT-y2853150 This study N/A
2BT-y2853DD This study N/A
pDEST17- rsuA This study N/A
pDEST17- crp This study N/A
pDEST17- y0390 This study N/A
pDEST17- fur This study N/A
2BT-cp60Y20 This study N/A
2BT-cp6-Sul20 This study N/A
Software and Algorithms
GraphPad Prism for data organization, analysis, and presentation GraphPad Software https://www.graphpad.com/scientific-software/prism/
Imagestudio™ for densitometry LI-COR Biosciences https://www.licor.com/bio/products/software/image_studio/
Canvas™ Draw 3 for Mac for creation of technical illustrations ACD Systems http://www.canvasgfx.com/en/products/canvasdraw