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. 2021 Apr 15;184(8):2135–2150.e13. doi: 10.1016/j.cell.2021.02.047
REAGENT or RESOURCE SOURCE IDENTIFIER
Biological samples

Mouse fast psoas myofibrils from a 3-month female BALB/c mouse King’s College London N/A

Deposited data

Sub-volume average of in situ actomyosin complex This paper EMD: 12289
Sub-volume average of re-centered myosin double-head This paper EMD: 12291
Sub-volume average of I-band thin filaments without troponin This paper EMD: 12292
Sub-volume average of I-band thin filaments including troponin This paper EMD: 12293
Homology model of in situ actomyosin complex This paper PDB: 7NEP
Cryo-EM structure of in vitro cytoplasmic actomyosin complex von der Ecken et al., 2016 PDB: 5JLH
Crystal structure of rigor-like squid myosin S1 fragment Yang et al., 2007 PDB: 3I5G
Cryo-EM structure of human cardiac thin filament in calcium-bound state Yamada et al., 2020 PDB: 6KN8
Cryo-EM structure of human cardiac thin filament in calcium-free state Yamada et al., 2020 PDB: 6KN7
Cryo-EM structure of relaxed myosin heads in insect flight muscle Hu et al., 2016; Knupp et al., 2019 PDB: 6SO3
Crystal structure of human myosin S2 fragment Blankenfeldt et al., 2006 PDB: 2FXM
Crystal structure of human α-actinin 2 Ribeiro et al., 2014 PDB: 4D1E
Cryo-EM structure of actin filament decorated by filamin A CH1 domain Iwamoto et al., 2018 PDB: 6D8C

Software and algorithms

SerialEM Mastronarde, 2005 https://bio3d.colorado.edu/SerialEM/
MotionCorr2 Zheng et al., 2017 https://emcore.ucsf.edu/ucsf-software
EMAN2 Tang et al., 2007 https://blake.bcm.edu/emanwiki/EMAN2
IMOD Kremer et al., 1996 https://bio3d.colorado.edu/imod/
crYOLO Wagner et al., 2019 https://cryolo.readthedocs.io
RELION3 Bharat and Scheres, 2016 https://www3.mrc-lmb.cam.ac.uk/relion/index.php?title=Main_Page
PEET Heumann et al., 2011; Nicastro et al., 2006 https://bio3d.colorado.edu/PEET/
ISAC Yang et al., 2012 http://sphire.mpg.de/wiki/doku.php?id=gpu_isac
SPHIRE Moriya et al., 2017 https://sphire.mpg.de/
TrackMate plug-in in Fiji Tinevez et al., 2017 https://imagej.net/TrackMate
Fiji (ImageJ) Schindelin et al., 2012; Schneider et al., 2012 https://imagej.net/Fiji
TEMPy Farabella et al., 2015 http://tempy.ismb.lon.ac.uk/
SWISS-MODEL Bertoni et al., 2017; Bienert et al., 2017; Guex et al., 2009; Studer et al., 2020; Waterhouse et al., 2018 https://swissmodel.expasy.org/
Chimera Pettersen et al., 2004 https://www.cgl.ucsf.edu/chimera/
Amira2019.3 Thermo Fisher Scientific https://www.thermofisher.com/us/en/home/industrial/electron-microscopy/electron-microscopy-instruments-workflow-solutions/3d-visualization-analysis-software/amira-life-sciences-biomedical.html
MUSCLE algorithm in msa R package Edgar, 2004 https://www.rdocumentation.org/packages/msa