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. 2021 Apr 11;27(4):801–814. doi: 10.1007/s12298-021-00989-1

Table 2.

Relative synonymous codon usage in M. urundeuva cp genome

Amino acid Codon Number of occurrences RSCU Proportion (%) Amino acid Codon Number of occurrences RSCU Proportion (%)
Phe UUU 936 1.27 5,68 Tyr UAU 748 1.59 3,61
UUC 541 0.73 UAC 192 0.41
Leu UUA 791 1.74 10,49 His CAU 478 1.48 2,48
UUG 577 1.27 CAC 168 0.52
CUU 558 1.23 Gln CAA 694 1.54 3,47
CUC 193 0.42 CAG 208 0.46
CUA 409 0.90 Asn AAU 975 1.53 4,90
CUG 199 0.44 AAC 300 0.47
Ile AUU 1075 1.46 8,47 Lys AAA 1042 1.48 5,41
AUC 460 0.63 AAG 365 0.52
AUA 668 0.91 Asp GAU 854 1.57 4,18
Met AUG 596 1.00 2,29 GAC 232 0.43
Val GUU 500 1.45 5,29 Glu GAA 1018 1.49 5,26
GUC 176 0.51 GAG 350 0.51
GUA 513 1.49 Cys UGU 226 1.49 1,17
GUG 188 0.55 UGC 77 0.51
Ser UCU 548 1.63 5,68 Trp UGG 450 1.00 1,73
UCC 339 1.01 Arg CGU 332 1.24 3,66
UCA 399 1.18 CGC 120 0.45
UCG 192 0.57 CGA 366 1.37
Pro CCU 408 1.55 4,05 CGG 134 0.50
CCC 199 0.76 Ser AGU 420 1.25 2,09
CCA 291 1.10 AGC 124 0.37
CCG 156 0.59 Arg AGA 488 1.82 2,52
Thr ACU 495 1.55 4,92 AGG 167 0.62
ACC 251 0.78 Gly GGU 587 1.30 6,93
ACA 386 1.21 GGC 165 0.37
ACG 147 0.46 GGA 722 1.60
Ala GCU 622 1.77 5,40 GGG 327 0.73
GCC 230 0.66 Stop UGA 16 0.59 0,32
GCA 385 1.10 UAA 45 1.65
GCG 167 0.48 UAG 21 0.77