Table 4.
KEGG pathways of genes corresponding to novel potential ALM-associated SNPs (adjP <0.05).
| KEGG pathway | KEGG ID | adjP | Genes |
|---|---|---|---|
| Pathways in cancer | 5200 | 2.24E−05 | BMP2, VEGFC, WNT16, WNT4, CDC42 |
| Basal cell carcinoma | 5217 | 2.43E−05 | BMP2, WNT16, WNT4 |
| Hedgehog signaling pathway | 4340 | 2.43E−05 | BMP2, WNT16, WNT4 |
| Wnt signaling pathway | 4310 | 3.00E−04 | LRP5, WNT16, WNT4 |
| Cytokine-cytokine receptor interaction | 4060 | 1.50E−03 | BMP2, VEGFC, TNFSF11 |
| Pancreatic cancer | 5212 | 1.60E−03 | VEGFC, CDC42 |
| Renal cell carcinoma | 5211 | 1.60E−03 | VEGFC, CDC42 |
| Melanogenesis | 4916 | 2.70E−03 | WNT16, WNT4 |
| T cell receptor signaling pathway | 4660 | 2.80E−03 | PRKCQ, CDC42 |
| Tight junction | 4530 | 3.60E−03 | PRKCQ, CDC42 |
adjP, p value adjusted by the multiple test adjustment.