TABLE 2.

Sources and serovar, ARG, VF, and ST profiles of some Salmonella isolates.

Isolate	Source	Serovar	ST	Replicons	Prophage	VFs	ARGs
SLM26	Pork	I 4,[5],12:i:-	34	Col(pHAD28), ColRNAI, IncHI2, IncHI2A, IncX4		fimD, sodCI, sspH2, slrP, siiE, misL, shdA, ratB, sopD2	ARR-3, aac(3)-IV, aac(6′)-Iaa, aac(6′)-Ib-cr, aadA1, aadA2b, aph(3′)-Ia, aph(4)-Ia, blaOXA-1, catB3, cmlA1, dfrA12, floR, mcr-1.1, oqxA, oqxB, sul1, sul2, sul3, tet(B)
SLM52	Chicken	Indiana	17	Col156, IncHI2, IncHI2A, IncQ1		fimD, siiE, cdtB, sopA, misL, ratB	aac(3)-IId, aac(3)-IV, aac(6′)-Iaa, aadA1, aadA2b, aph(3″)-Ib, aph(3′)-Ia, aph(4)-Ia, aph(6)-Id, blaCTX-M-65, blaTEM-1B, catA1, cmlA1, dfrA12, floR, fosA3, oqxA, oqxB, rmtB, sul1, sul2, sul3, tet(A)
SLM65	Chicken	Thompson	26	IncHI2, IncHI2A, p0111	Gifsy-1	siiE, fimC, misL, ratB, slrP, fimD	ARR-3, aac(3)-IV, aac(6′)-Iaa, aac(6′)-Ib-cr, aadA1, aadA2b, aph(3″)-Ib, aph(3′)-Ia, aph(4)-Ia, aph(6)-Id, blaCTX-M-14, blaCTX-M-55, blaOXA-1, catB3, cmlA1, dfrA12, floR, fosA3, mph(A), sul1, sul2, sul3, tet(A)
SLM68	Chicken	Thompson	26	IncHI2, IncHI2A, p0111	Gifsy-1	siiE, fimC, misL, ratB, slrP, fimD	ARR-3, aac(3)-IV, aac(6′)-Iaa, aac(6′)-Ib-cr, aadA1, aadA2b, aph(3″)-Ib, aph(3′)-Ia, aph(4)-Ia, aph(6)-Id, blaCTX-M-14, blaCTX-M-55, blaOXA-1, catB3, cmlA1, dfrA12, floR, fosA3, mph(A), sul1, sul2, sul3, tet(A)
SLM134	Duck	Indiana	17	IncHI2, IncHI2A, IncQ1, p0111		fimD, siiE, sopB/sigD, cdtB, sopA, misL, ratB	ARR-3, aac(3)-IV, aac(6′)-Iaa, aac(6′)-Ib-cr, aadA5, aph(3″)-Ib, aph(3′)-Ia, aph(4)-Ia, aph(6)-Id, blaCTX-M-65, blaOXA-1, blaTEM-1B, catA1, catB3, dfrA17, floR, fosA3, oqxA, oqxB, sul1, sul2, tet(A)
SLM144	Duck	Indiana	17	–		fimD, siiE, sopB/sigD, cdtB, sopA, misL, ratB	ARR-3, aac(3)-IV, aac(6′)-Iaa, aac(6′)-Ib-cr, aadA5, aph(3″)-Ib, aph(4)-Ia, aph(6)-Id, armA, blaCTX-M-55, blaOXA-1, catB3, dfrA17, floR, fosA3, mph(E), msr(E), oqxA, oqxB, sul1, sul2, tet(A)
SLM145	Duck	Indiana	17	Col156		fimD, siiE, cdtB, sopA, misL, ratB	ARR-3, aac(6′)-Iaa, aac(6′)-Ib-cr, aadA1, aadA2b, aadA5, aph(3″)-Ib, aph(6)-Id, armA, blaOXA-1, catB3, cmlA1, dfrA17, floR, fosA3, mph(E), msr(E), oqxA, oqxB, sul1, sul2, sul3, tet(A)