Table 3.
Classification of genes enriched in the cell cycle from Reactome pathways among the 434 SRTNS
M | M checkpoint | S | S checkpoint | Rest | Common | ||
---|---|---|---|---|---|---|---|
AAAS | NCAPG2 | BUB1B | NDC80 | CDCA5 | CCNA2 | BLM | PSMD3 |
CDCA5 | NCAPH | CCNB1 | NUF2 | CUL1 | CDC45 | CDC7 | PSMD14 |
CEP152 | NCAPH2 | CDC20 | NUP107 | FEN1 | MCM2 | CHEK1 | RPS27A |
HAUS1 | NDC1 | CDCA8 | NUP133 | PCNA | MCM3 | GMNN | |
HAUS2 | NUP153 | CDK1 | NUP160 | POLA1 | MCM4 | MCM10 | |
HAUS3 | NUP155 | CENPF | NUP85 | POLA2 | MCM5 | MDC1 | |
HAUS4 | NUP205 | CENPH | PLK1 | POLE | MCM6 | MND1 | |
HAUS5 | NUP210 | CENPI | RCC2 | PRIM1 | MCM7 | TOP3A | |
HAUS6 | NUP50 | CENPO | SKA1 | PRIM2 | ORC6 | TOPBP1 | |
HAUS8 | NUP93 | CENPQ | SPC24 | RFC2 | TPX2 | ||
KIF20A | SMC2 | CENPU | SPC25 | RFC4 | WHSC1 | ||
MASTL | SMC4 | ERCC6L | XPO1 | RFC5 | |||
NCAPD2 | VRK1 | INCENP | ZW10 | ||||
NCAPD3 | KIF2C | ZWILCH | |||||
NCAPG | KNTC1 | ZWINT |
STRING version 11.0 was used to conduct the enrichment analysis. Experimentally tested genes are highlighted in bold face. ‘M’ and ‘S’ each represents genes specific the M and S phase, respectively. ‘M checkpoint’ and ‘S checkpoint’ each means genes specific to M and S phase check point regulation, respectively, which were obtained by taking the intersection of genes between ‘M phase’ or ‘S phase’ and ‘cell cycle checkpoint’ pathways. ‘Common’ and ‘Rest’ each represents genes present in and absent from all ‘M’, ‘M checkpoint’, ‘S’, ‘S checkpoint’ categories, respectively