Table 2.
Gene ontology terms of the biological process category associated with Soeum type.
| PANTHER GO-Slim biological process term | Number of genes | p valued | Combined scoree | ||
|---|---|---|---|---|---|
| Reference lista | Target listb | Expectedc | |||
| Response to xenobiotic stimulus (GO:0009410) | 40 | 12 | 0.37 | 5.19E − 12 | 205.5949 |
| Drug metabolic process (GO:0017144) | 127 | 21 | 1.19 | 5.60E − 12 | 342.0589 |
| Response to drug (GO:0042493) | 81 | 16 | 0.76 | 8.09E − 09 | 252.1907 |
| Terpenoid metabolic process (GO:0006721) | 11 | 5 | 0.1 | 9.17E − 09 | 63.41361 |
| Isoprenoid metabolic process (GO:0006720) | 14 | 5 | 0.13 | 4.93E − 08 | 57.00586 |
| Diterpenoid metabolic process (GO:0016101) | 10 | 4 | 0.09 | 2.56E − 07 | 41.92858 |
| Positive regulation of leukocyte proliferation (GO:0070665) | 3 | 2 | 0.03 | 3.39E − 07 | 16.30587 |
| Regulation of smooth muscle contraction (GO:0006940) | 3 | 2 | 0.03 | 3.56E − 07 | 16.26849 |
| Positive regulation of mononuclear cell proliferation (GO:0032946) | 3 | 2 | 0.03 | 1.14E − 06 | 16.21936 |
| Positive regulation of lymphocyte proliferation (GO:0050671) | 3 | 2 | 0.03 | 2.53E − 06 | 16.18301 |
aNumber of genes in the reference list that map to this PANTHER classification category. bNumber of genes in the target gene list that map to this PANTHER classification category. cThe expected value is the number of genes that can be expected in the target gene list for this PANTHER category based on the reference list. dp values are determined by binomial statistics with Benjamini–Hochberg corrections. eCombined score is computed by taking the log of the p value and multiplying that by the Z-score of the deviation from the expected rank.