Table 4.
Summary of bacteria down to genus level detected in oral microbiomes of subjects A, B, and C by using 16S rDNA next-generation sequencing and bioinformatics (alphabetical order; percentage of appearance in saliva)
| Genus | % of appearance in saliva | Genus | % of appearance in saliva | ||||
|---|---|---|---|---|---|---|---|
| Subject A | Subject B | Subject C | Subject A | Subject B | Subject C | ||
| Acinetobacter | - | 0.0002 | 0.0003 | Listeria | 0.0002 | 0.0012 | 0.0008 |
| Actinobacillus | 0.4555 | 0.3082 | 0.5673 | Lysinibacillus | - | 0.0002 | - |
| Actinomyces | 2.4590 | 4.7042 | 3.2081 | Megasphaera | 2.0961 | 0.4093 | 0.3995 |
| Aerococcus | 0.1050 | 0.0002 | 0.0003 | Mobiluncus | - | 0.0249 | 0.0620 |
| Aggregatibacter | 0.1753 | 0.1427 | 0.2611 | Mogibacterium | 0.3825 | 0.3154 | 0.1561 |
| Agrobacterium | 0.0004 | 0.0005 | 0.0005 | Mollicutes RF39 | 0.0647 | 0.0407 | 0.0479 |
| Akkermansia | 0.0002 | 0.0002 | 0.0003 | Moraxella | 0.0004 | - | 0.0008 |
| Atopobium | 1.9965 | 0.9902 | 1.1808 | Moryella | 0.1146 | 0.0005 | 0.1020 |
| Bacillus | - | 0.0002 | - | Mycoplasma | 0.0011 | 0.0002 | 0.0022 |
| Bacteroidales S24-7 | 0.0054 | 0.0035 | 0.0044 | Neisseria | 4.5475 | 8.6061 | 12.9174 |
| Bacteroides | 0.0018 | 0.0026 | 0.0016 | Oribacterium | 0.2185 | 0.3268 | 0.5453 |
| Bifidobacterium | 0.0040 | - | 0.0321 | Oscillospira | 0.0007 | 0.0007 | 0.0011 |
| Bulleidia | 0.4242 | 0.4873 | 0.6032 | Oxalobacter | 0.0002 | 0.0002 | - |
| Butyrivibrio | - | 0.0316 | 0.0617 | Paludibacter | 0.0992 | 0.0014 | 0.0011 |
| Campylobacter | 0.7986 | 0.9012 | 1.3790 | Parabacteroides | - | 0.0002 | - |
| Candidatus Absconditabacteria | 0.0098 | 0.0030 | 0.2660 | Paracoccus | - | 0.0005 | - |
| Candidatus Gracilibacteria BD1-5 | 0.0154 | 0.0012 | 0.0008 | Parvimonas | 0.0271 | 0.1371 | 0.0057 |
| Candidatus Saccharibacteria F16 | 0.2995 | 0.2656 | 0.4631 | Peptococcus | - | 0.0009 | - |
| Capnocytophaga | 0.3136 | 0.6781 | 0.7960 | Peptostreptococcus | 0.3143 | 1.2703 | 0.2208 |
| Cardiobacterium | 0.0139 | 0.0139 | 0.0041 | Porphyromonas | 4.9405 | 2.6363 | 1.6257 |
| Catonella | 0.1260 | 0.2022 | 0.1381 | Prevotella | 28.5108 | 23.7212 | 28.6407 |
| Coprococcus | 0.0004 | - | - | Propionibacterium | 0.0011 | - | 0.0003 |
| Corynebacterium | 0.0911 | 0.0493 | 0.0286 | Propionivibrio | 0.0002 | - | - |
| Dehalobacterium | 0.0002 | - | - | Pseudomonas | 0.0004 | 0.0007 | 0.0014 |
| Delftia | 0.0004 | 0.0007 | 0.0011 | Pseudoramibacter | 0.0004 | - | 0.0011 |
| Desulfobulbus | 0.0004 | - | - | Ralstonia | 0.0002 | - | - |
| Desulfovibrio | 0.0002 | - | 0.0003 | Rikenella | 0.0018 | 0.0009 | 0.0003 |
| Dethiosulfovibrionaceae TG5 | 0.0092 | - | - | Rothia | 2.2709 | 3.9489 | 4.1385 |
| Dialister | 0.0470 | 0.0149 | 0.0103 | Ruminococcus | 0.0009 | 0.0002 | 0.0003 |
| Eikenella | 0.0004 | 0.0019 | 0.0022 | Scardovia | 0.0045 | 0.0016 | 0.0024 |
| Enterococcus | 0.1394 | 0.2259 | 0.2012 | Schwartzia | 0.0051 | - | 0.0008 |
| Escherichia | 0.0002 | 0.0002 | 0.0008 | Selenomonas | 0.1298 | 0.2466 | 0.6986 |
| Eubacterium | 0.0002 | - | - | Slackia | 0.0170 | 0.0012 | 0.0003 |
| Filifactor | - | 0.0007 | 0.0005 | Staphylococcus | 0.0058 | 0.0044 | 0.0005 |
| Fusobacterium | 6.0281 | 3.7349 | 2.8685 | Streptococcus | 18.6900 | 20.8486 | 17.5940 |
| Gemella | 4.3812 | 3.6017 | 2.3314 | Streptophyta | - | - | 0.0003 |
| Granulicatella | 0.0222 | 0.0425 | 0.0373 | Sutterella | 0.0002 | - | - |
| Haemophilus | 4.7774 | 6.5329 | 6.1481 | Tannerella | 0.5797 | 0.1848 | 0.1634 |
| Kingella | 0.0508 | 0.0600 | 0.1150 | Treponema | 0.0298 | 0.0112 | 0.0416 |
| Lachnospira | 0.4340 | 0.4620 | 0.1640 | Vagococcus | 0.0049 | 0.0098 | 0.0041 |
| Lactobacillus | 0.0022 | 0.0009 | 0.0098 | Veillonella | 9.3103 | 11.6926 | 8.8377 |
| Lautropia | 0.0537 | 0.0056 | 0.0258 | Weeksella | 0.1222 | 0.1274 | 0.7362 |
| Leptotrichia | 4.2630 | 1.9563 | 2.1356 | ||||