TABLE 4.
Gene SNP | Sheep breed | Genotype frequencies |
Allele frequencies |
Ratio | χ2 | |||
ABCA1 18100859 | AA | AG | GG | A | G | A/G | ||
Altay sheep (104) | 0.327 (34) | 0.481 (50) | 0.192 (20) | 0.567 (118) | 0.433 (90) | 1.311 | 0.045 | |
XFW sheep (104) | 0.212 (22) | 0.423 (44) | 0.365 (38) | 0.423 (88) | 0.577 (120) | 0.733 | 1.849 | |
Hu sheep (104) | 0.135 (14) | 0.365 (38) | 0.500 (52) | 0.308 (66) | 0.683 (142) | 0.464 | 2.552 | |
ABCA1 18167532 | TT | TC | CC | T | C | T/C | ||
Altay sheep (104) | 0 (0) | 0.106 (11) | 0.894 (93) | 0.053 (11) | 0.947 (197) | 0.056 | 0.324 | |
XFW sheep (104) | 0.865 (90) | 0.096 (10) | 0.038 (4) | 0.913 (190) | 0.087 (18) | 10.556 | 15.97** | |
Hu sheep (104) | 0 (0) | 0.962 (100) | 0.038 (4) | 0.481 (100) | 0.519 (108) | 0.926 | 89.16** | |
CPT1A 45468209 | GG | GT | TT | G | T | G/T | ||
Altay sheep (104) | 0.346 (36) | 0.654 (68) | 0 (0) | 0.673 (140) | 0.327 (68) | 2.058 | 24.54** | |
XFW sheep (104) | 0.385 (40) | 0.577 (60) | 0.038 (4) | 0.673 (140) | 0.327 (68) | 2.058 | 10.05** | |
Hu sheep (104) | 0.173 (18) | 0.644 (67) | 0.183 (19) | 0.495 (103) | 0.505 (105) | 0.981 | 8.661* | |
FADS2 39768783 | CC | CT | TT | C | T | C/T | ||
Altay sheep (104) | 0.106 (11) | 0.894 (93) | 0 (0) | 0.553 (115) | 0.447 (93) | 1.237 | 68.01** | |
XFW sheep (104) | 0.385 (40) | 0.615 (64) | 0 (0) | 0.692 (144) | 0.308 (64) | 2.250 | 20.54** | |
Hu sheep (104) | 0.683 (71) | 0.317 (33) | 0 (0) | 0.803 (175) | 0.139 (33) | 5.303 | 3.698 | |
FBP2 31747535 | AA | AG | GG | A | G | A/G | ||
Altay sheep (104) | 0.529 (55) | 0.385 (40) | 0.087 (9) | 0.721 (150) | 0.279 (58) | 2.584 | 0.198 | |
XFW sheep (104) | 0.644 (67) | 0.269 (28) | 0.087 (9) | 0.779 (162) | 0.221 (46) | 3.522 | 4.964 | |
Hu sheep (104) | 0.596 (62) | 0.337 (35) | 0.067 (7) | 0.764 (159) | 0.236 (49) | 3.244 | 0.447 | |
PLIN1 20197576 | CC | CG | GG | C | G | C/G | ||
Altay sheep (78) | 0 (0) | 0.231 (24) | 0.770 (80) | 0.115 (24) | 0.885 (184) | 0.130 | 1.327 | |
XFW sheep (78) | 0 (0) | 0.077 (8) | 0.923 (96) | 0.038 (8) | 0.962 (200) | 0.040 | 0.125 | |
Hu sheep (78) | 0 (0) | 0.295 (30) | 0.705 (74) | 0.147 (30) | 0.853 (178) | 0.168 | 2.333 | |
SLC27A2 57036072 | GG | GT | TT | G | T | G/T | ||
Altay sheep (104) | 0.337 (35) | 0.587 (61) | 0.077 (8) | 0.630 (131) | 0.370 (77) | 1.701 | 6.915* | |
XFW sheep (104) | 0.038 (4) | 0.125 (13) | 0.837 (87) | 0.101 (21) | 0.899 (187) | 0.112 | 89.163** | |
Hu sheep (104) | 0.385 (40) | 0.596 (62) | 0.019 (2) | 0.683 (142) | 0.317 (66) | 2.151 | 14.70** |
XFW, Xinjiang fine wool sheep. *P < 0.05 (χ20.05 = 5.99); **P < 0.01 (χ20.01 = 9.21).