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. Author manuscript; available in PMC: 2021 Apr 22.
Published in final edited form as: J Alzheimers Dis. 2020;76(4):1267–1280. doi: 10.3233/JAD-200040

Table 3.

Metabolites associated with cognition that were retained in LASSO penalized regression models (N = 736)

HMBD Biochemical Super Pathway Sub Pathway βwhole a cohort βwithoutb diabetesb βmedDietc
POSITIVELY ASSOCIATED METABOLITES
4-methoxyphenol sulfate Amino Acid Tyrosine Metabolism 0.631 0.073 0.228
N-stearoylserine* Lipid Endocan-binoid 0.582 0.479
HMDB01999 eicosapentaenoate (EPA; 20 : 5n3) Lipid Polyunsaturated Fatty Acid (n3 and n6) 0.494 0.051 0.104
3-hydroxyhexanoate Lipid Fatty Acid, Monohydroxy 0.346
HMDB02329 oxalate (ethanedioate) Cofactors and Vitamins Ascorbate and Aldarate Metabolism 0.328
HMDB07218 oleoyl-oleoyl-glycerol (18 : 1/18 : 1) [1]* Lipid Diacylglycerol 0.288
lignoceroyl sphingomyelin (d18 : 1/24 : 0) Lipid Sphingolipid Metabolism 0.188
HMDB00574 Cysteine Amino Acid Methionine, Cysteine, SAM and Taurine Metabolism 0.152
HMDB04705 12,13-DiHOME Lipid Fatty Acid, Dihydroxy 0.128 0.088
HMDB02823 docosatrienoate (22 : 3n3) Lipid Polyunsaturated Fatty Acid (n3 and n6) 0.118
HMDB33844 beta-cryptoxanthin Cofactors and Vitamins Vitamin A Metabolism 0.108 0.195
HMDB08141 1-linoleoyl-2-linolenoyl-GPC (18:2/18:3)* Lipid Phosphatidylcholine (PC) 0.089 0.002
HMDB00345 3-hydroxyadipate* Lipid Fatty Acid, Dicarboxylate 0.065
1-stearoyl-2-oleoyl-GPG (18 : 0/18 : 1) Lipid Phosphatidylglycerol (PG) 0.065
HMDB00017 Pyridoxate Cofactors and Vitamins Vitamin B6 Metabolism 0.048
HMDB00661 glutarate (C5-DC) Lipid Fatty Acid, Dicarboxylate 0.045
HMDB61115 tryptophan betaine Amino Acid Tryptophan Metabolism 0.025 0.240
HMDB00202 methylmalo-te (MMA) Lipid Fatty Acid Metabolism (also BCAA Metabolism) 0.013 0.046
HMDB00760 Hyocholate Lipid Secondary Bile Acid Metabolism 0.002
NEGATIVELY ASSOCIATED METABOLITES
HMDB61684 N-acetylisoleucine Amino Acid Leucine, Isoleucine and Valine Metabolism −0.660 −0.287 −0.824
sphingomyelin (d18:2/16: 0, d18 : 1/16 : 1)* Lipid Sphingolipid Metabolism −0.546 −0.339
(N(1)+N(8))-acetylspermidine Amino Acid Polyamine Metabolism −0.405 −0.169
arabote/xylote Carbohydrate Pentose Metabolism −0.351
HMDB00190 lactate Carbohydrate Glycolysis, Gluconeogenesis, and Pyruvate Metabolism −0.281
glycosyl-N-(2-hydroxynervonoyl)-sphingosine (d18 : 1/24: 1(2OH))* Lipid Ceramides −0.277 −0.051 −0.071
HMDB06409 tyramine O-sulfate Amino Acid Tyrosine Metabolism −0.256 −0.053 −0.086
HMDB00063 Cortisol Lipid Corticosteroids −0.237
3-methylcytidine Nucleotide Pyrimidine Metabolism, Cytidine containing −0.237
gamma-glutamylcitrulline* Peptide Gamma-glutamyl Amino Acid −0.231
HMDB07257 linoleoyl-arachidonoyl-glycerol (18:2/20 : 4) [1]* Lipid Diacylglycerol −0.228 −0.168
sphingomyelin (d18 : 2/18 : 1)* Lipid Sphingolipid Metabolism −0.224
HMDB03464 4-guanidinobutanoate Amino Acid Guanidino and Acetamido Metabolism −0.201
HMDB02802 cortisone Lipid Corticosteroids −0.174
HMDB00258 sucrose Carbohydrate Disaccharides and Oligosaccharides −0.162 −0.070 −0.160
HMDB07228 oleoyl-arachidonoyl-glycerol (18:1/20:4) [2]* Lipid Diacylglycerol −0.151
HMDB00126 glycerol 3-phosphate Lipid Glycerolipid Metabolism −0.113 −0.169
HMDB09069 1-oleoyl-2-arachidonoyl-GPE (18:1/20:4)* Lipid Phosphatidylethanolamine (PE) −0.106 −0.092 −0.108
HMDB00012 2’-deoxyuridine Nucleotide Pyrimidine Metabolism, Uracil containing −0.100
HMDB11745 N-acetylmethionine Amino Acid Methionine, Cysteine, SAM and Taurine Metabolism −0.097
acisoga Amino Acid Polyamine Metabolism −0.095 −0.372
HMDB00522 3-methylglutaco-te Amino Acid Leucine, Isoleucine and Valine Metabolism −0.089
HMDB01547 corticosterone Lipid Corticosteroids −0.082 −0.195
cis-4-decenoylcarnitine (C10: 1) Lipid Fatty Acid Metabolism (Acyl Carnitine) −0.082 −0.085
HMDB11756 N-acetylleucine Amino Acid Leucine, Isoleucine and Valine Metabolism −0.080 −0.122
HMDB00631 glycodeoxycholate Lipid Secondary Bile Acid Metabolism −0.066
HMDB00122 glucose Carbohydrate Glycolysis, Gluconeogenesis, and Pyruvate Metabolism −0.063
HMDB00754 beta-hydroxyisovalerate Amino Acid Leucine, Isoleucine and Valine Metabolism −0.062
HMDB02820 1-methyl-4-imidazoleacetate Amino Acid Histidine Metabolism −0.044
HMDB09789 1-palmitoyl-2-arachidonoyl-GPI (16 : 0/20 : 4)* Lipid Phosphatidylinositol (PI) −0.035
HMDB00669 2-hydroxyphenylacetate Amino Acid Tyrosine Metabolism −0.016 −0.295
HMDB04089 N-formylanthranilic acid Amino Acid Tryptophan Metabolism −0.012
HMDB10395 1-arachidonoyl-GPC (20 : 4n6)* Lipid Lysophospholipid −0.005
HMDB01173 5-methylthioadenosine (MTA) Amino Acid Polyamine Metabolism −0.034
HMDB02331 1-ribosyl-imidazoleacetate* Amino Acid Histidine Metabolism −0.133
N-linoleoyltaurine* Lipid Endocanbinoid −0.112
sphingomyelin (d18 : 2/24 : 2)* Lipid Sphingolipid Metabolism −0.197
HMDB00232 quinolite Cofactors and Vitamins Nicotite and Nicotimide Metabolism −0.163
HMDB00709 cysteinylglycine disulfide* Amino Acid Glutathione Metabolism −0.078
HMDB00730 isobutyrylglycine Amino Acid Leucine, Isoleucine and Valine Metabolism −0.015
HMDB00854 formiminoglutamate Amino Acid Histidine Metabolism −0.320
glyco-beta-muricholate** Lipid Primary Bile Acid Metabolism −0.219
hexadecenedioate (C16 : 1-DC)* Lipid Fatty Acid, Dicarboxylate −0.089
N-palmitoyl-sphingadienine (d18 : 2/16 : 0)* Lipid Sphingolipid Metabolism −0.186
a

beta coefficient from a LASSO regression that initially included all the metabolites among all partcipants (n = 736) with metabolomic measures.

b

beta coefficient from a LASSO regression that initially included all the metabolites among (n = 453) participants without diabetes.

c

beta coefficient from a LASSO regression that initially included all the metabolites among (n = 329) participants who had Mediterranean diet score of 5 or above.

d

metabolites also identified in linear regression analyses after FDR correction (Table 2). Results are only presented with FDR adjusted p-value <0.05.