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. 2021 Jan 4;280(35):31257–31266. doi: 10.1074/jbc.M502577200

Table II.

Inter- and intra-interactions of SARS 3CLpro dimers

Atom pairs in the interacting amino acid residues with contact distances <3.5 Å are listed.

Residue 1 Atom 1 Residue 2 Atom 2 Distance
Å
Interactions of N- terminus from protomer A
A Ser1 Oγ[ρ] B Glu166 Oϵ2 2.56
A Ser1 N B Glu166 Oϵ1 2.48
A Ser1 N B His172 N 2.83
A Gly2 O B Ser139 Oγ[ρ] 2.90
A Lys5 N A Glu290 Oϵ1 2.53
A Ala7 N B Val125 O 3.01
A Ala7 O B Val125 N 2.74
Interactions of N- terminus from protomer B
B Ser1 N A Glu166 Oϵ1 2.95
B Ser1 N A His172 N 3.16
B Ala7 N A Val125 O 3.04
B Ala7 O A Val125 N 2.80
Interactions of C- terminus from protomer A
A Ser301 N A Val297 N 2.62
A Val303 O B Ser123 Oγ[ρ] 3.53
A Gln306
Oϵ1
A Lys12
Nζ[ρ]
3.19