Table 2.
Healthy free- ranging (HF) | Healthy corralled (HC) | CID | HF compared with HC | HF compared with CID | HC compared with CID | HF compared with HC+CID | |
Phylum | Median (range) | P | |||||
Firmicutes | 73 | 65 | 61 | 0.004 | 0.003 | 0.511 | <0.001 |
(53–95) | (44–92) | (4.6–86) | |||||
Bacteroidetes | 19 | 28 | 29 | <0.001 | 0.009 | 0.983 | <0.001 |
(3.0–35) | (5.0–50) | (0.7–46) | |||||
Proteobacteria | 1.3 | 0.9 | 1.7 | 0.212 | 0.320 | 0.007 | not applicable |
(0–11) | (0.1–5.4) | (0.1–76) | |||||
Spirochaetae | 0.8 | 0.7 | 1.3 | 0.937 | 0.074 | 0.308 | 0.138 |
(0.0–3.8) | (0.1–8.1) | (0.0–7.6) | |||||
Actinobacteria | 0.5 | 0.5 | 0.4 | 0.558 | 0.308 | 0.558 | 0.136 |
(0.0–3.1) | (0.2–1.3) | (0.1–56) | |||||
Euryarchaeota | 0.0 | 0.4 | 0.4 | 0.203 | 0.039 | 0.354 | 0.049 |
(0.0–15) | (0.0–3.3) | (0.0–5.0) | |||||
Tenericutes | 1.0 | 0.4 | 0.4 | <0.001 | <0.001 | 0.986 | <0.001 |
(0.0–3.1) | (0.0–1.1) | (0.0–2.0) |