Table 3.

Relative abundance of predominant bacterial genera (overall relative abundance >1.0%) present in the feces of rhesus macaques

	Healthy free- ranging (HF)	Healthy corralled (HC)	CID	HF compared with HC	HF compared with CID	HC compared with CID	HF compared with HC+CID
Genus	Median (range)			P
Lactobacillus	22	20	12	0.302	0.009	0.088	not applicable
	(0.0–73)	(1.4–42)	(0.0–41)
Prevotella	2.4	4.5	4.0	0.002	0.165	0.685	0.008
	(0.4–7.1)	(0.2–12)	(0.0–8)
Streptococcus	0.2	3.4	1.3	<0.001	<0.001	0.099	not applicable
	(0.0–11)	(0.2–17)	(0.1–9.1)
Phascolarctobacterium	0.8	2.6	1.5	0.001	0.321	0.070	not applicable
	(0.0–5.5)	(0.3–5.3)	(0.0–8.8)
Alloprevotella	0.4	2.3	3.0	<0.001	<0.001	0.181	<0.001
	(0.0–2.8)	(0.1–6.2)	(0.0–8.6)
Faecalibacterium	0.6	1.8	2.4	<0.001	<0.001	0.309	<0.001
	(0.0–5.1)	(0.1–4.9)	(0.1–4.8)
Blautia	0.9	1.1	1.0	0.274	0.622	0.654	0.209
	(0.1–4.9)	(0.3–4.7)	(0.0–3.1)
Subdoligranulum	0.9	1.4	1.6	0.045	0.016	0.436	0.002
	(0.1–2.6)	(0.1–4.1)	(0.1–7.7)
Megasphaera	0.0	0.7	2.3	<0.001	<0.001	0.008	<0.001
	(0.0–0.1)	(0.0–5.7)	(0.1–11)
Roseburia	0.3	1.5	1.3	<0.001	<0.001	0.715	<0.001
	(0.0–3.0)	(0.2–2.7)	(0.0–3.2)
Ruminococcus	1.2	0.8	0.3	0.018	<0.001	<0.001	not applicable
	(0.0–8.8)	(0.3–2.0)	(0.0–2.0)