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. 2021 Apr 23;10(4):giab024. doi: 10.1093/gigascience/giab024

Table 2:

Results of contig anchoring on pseudochromosomes using Hi-C data

LG Length (bp) Gene No. Contig N50 length (bp) Contig No. No. of gaps (bp)
LG01 141,585,364 3,535 2,274,693 122 12,100
LG02 144,576,766 3,347 3,700,000 88 8,700
LG03 99,268,963 2,454 1,068,300 196 19,500
LG04 99,542,347 2,554 894,135 225 22,400
LG05 122,084,758 3,159 2,900,000 96 9,500
LG06 102,382,230 2,442 2,078,006 106 10,500
LG07 122,148,919 2,720 3,437,001 91 9,000
LG08 101,363,610 2,456 2,665,365 138 13,700
LG09 90,511,107 2,243 1,458,983 124 12,300
LG10 94,491,177 2,295 1,062,238 172 17,100
LG11 85,619,405 1,927 619,639 249 24,800
LG12 76,129,233 1,754 767,559 180 17,900
LG13 79,962,191 1,837 2,050,444 117 11,600
LG14 63,392,598 1,391 1,000,000 125 12,400
Total 1,423,058,668 34,114 1,700,000 2,029 201,500

Gaps are preset at 100 Ns.