Table 2.
Province (P. insidiosum Isolates) |
Sampling Locations | Water Source (Collection Site) |
Strain ID | DNA Barcodes | Genotype (Clade) | MALDI-TOF MS | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Code | GPS Coordinate |
rDNA | cox1 | cox2 | DNA Barcode |
Multiplex PCR | Score | Proteotype | ||||||
Accession | % Identity |
Accession | % Identity |
Accession | % Identity |
|||||||||
Bangkok (n = 7) |
BK01 | 13.770966, 100.516366 | Pond#1 (zoo) | BKDZ01 | LC556017 | 99.9 | LC547937 | 94.3 | LC549516 | 100.0 | III | III | - | - |
Pond#2 (zoo) | BKDZ02 | LC556018 | 98.0 | LC547938 | 94.1 | LC549517 | 100.0 | III | III | 2.200 | B | |||
BK04 | 13.929843, 100.568340 | Pond#3 (park) | RT02 | LC556073 | 99.9 | LC547929 | 99.7 | LC549523 | 100.0 | II | II | - | - | |
BK09 | 13.686055, 100.662055 | Pond#4 (park) | RM9-02 | LC556063 | 99.5 | LC547930 | 100.0 | LC549519 | 100.0 | II | II | - | - | |
RM9-03 | LC556064 | 99.8 | LC547931 | 100.0 | LC549520 | 100.0 | II | II | - | - | ||||
RM9-04 | LC556065 | 99.8 | LC547932 | 100.0 | LC549521 | 100.0 | II | II | - | - | ||||
RM9-05 | LC556066 | 99.4 | LC547933 | 100.0 | LC549522 | 100.0 | II | II | - | - | ||||
Chachoengsao (n = 6) |
CS01 | 13.668917, 101.191042 | Pond#5 | CCS01 | LC556020 | 99.9 | LC547923 | 100.0 | LC549500 | 100.0 | II | II | - | - |
CS03 | 13.606459, 101.232437 | Rice Field#1 | CCS03 | LC556022 | 99.8 | LC547924 | 100.0 | LC549501 | 100.0 | II | II | - | - | |
CCS04 | LC556023 | 100.0 | LC547925 | 100.0 | LC549502 | 100.0 | II | II | - | - | ||||
CCS05 | LC556024 | 100.0 | LC547926 | 100.0 | LC549503 | 100.0 | II | II | - | - | ||||
Rice Field#2 | CCS07 | LC556025 | 99.9 | LC547927 | 100.0 | LC549504 | 100.0 | II | II | - | - | |||
CCS08 | LC556026 | 99.9 | LC547928 | 100.0 | LC549505 | 100.0 | II | II | - | - | ||||
Kanchanaburi (n = 11) |
KB01 | 14.138575, 99.324756 | Pond#6 | KCB12 | LC556043 | 99.4 | - | - | - | - | - | II | - | - |
KB03 | 14.027293, 99.791957 | Rice Field#3 | KCB01 | LC556032 | 99.8 | LC547939 | 94.4 | LC549506 | 100.0 | III | III | 2.490 | B | |
KCB02 | LC556033 | 99.9 | LC547919 | 99.3 | LC549507 | 100.0 | II | II | 2.274 | A | ||||
KCB03 | LC556034 | 99.7 | LC547940 | 94.3 | LC549508 | 100.0 | III | III | 2.151 | B | ||||
KCB04 | LC556035 | 99.4 | LC547941 | 94.4 | LC549509 | 100.0 | III | III | 2.187 | B | ||||
KCB05 | LC556036 | 99.9 | LC547920 | 99.3 | LC549510 | 100.0 | II | II | 2.149 | A | ||||
KCB06 | LC556037 | 99.7 | LC547942 | 94.4 | LC549511 | 100.0 | III | III | - | - | ||||
KCB07 | LC556038 | 100.0 | LC547921 | 99.3 | LC549512 | 100.0 | II | II | 2.196 | A | ||||
KCB08 | LC556039 | 99.9 | LC547943 | 94.4 | LC549513 | 100.0 | III | III | 2.400 | B | ||||
KCB09 | LC556040 | 99.8 | LC547944 | 94.4 | LC549514 | 100.0 | III | III | 2.187 | B | ||||
KCB10 | LC556041 | 99.4 | LC547922 | 99.3 | LC549515 | 100.0 | II | II | 2.200 | A | ||||
Ratchaburi (n = 1) |
RB01 | 13.806338, 99.689354 | Pond#7 | RCB04 | LC556056 | 99.6 | LC547936 | 99.3 | LC549518 | 100.0 | II | II | - | - |
Trang (n = 2) |
TG01 | 07.534068, 99.618507 | Rice Field#4 | TRG02 | LC556075 | 99.9 | LC547934 | 100.0 | LC549524 | 100.0 | II | II | - | - |
Pond#8 | TRG03 | LC556076 | 99.9 | LC547935 | 100.0 | LC549525 | 100.0 | II | II | - | - |