Skip to main content
. 2021 Apr 23;7(17):eabd2274. doi: 10.1126/sciadv.abd2274

Table 2. Additional Propithecus spp. genome sequence descriptions. SNVs, single nucleotide variants.

Measure P. diadema P. diadema P. tattersalli P. tattersalli P. verreauxi P. verreauxi
Reads 765,447,178 749,239,612 717,945,044 716,893,458 954,251,816 790,776,474
Mapping rate 94.3% 94.5% 94.6% 95.1% 94.5% 94.6%
PCR duplication rate 4.0% 3.4% 3.2% 2.5% 15.0% 3.4%
Average phred
quality
36.1 36.1 36.3 36.8 38.9 35.8
Average depth
coverage
23× 23× 23× 23× 39× 33×
Variants called (after
filtering)
40,822,967 40,851,734 22,519,595 22,701,370 26,512,635 24,814,200
SNVs 37,479,654 37,516,145 20,714,023 20,865,986 24,376,639 22,875,767
Indels 3,343,313 3,335,589 1,805,572 1,835,384 2,281,800 1,938,433