Table 5.
The viral scaffolds mostly represented in the Baikal samples (including the published ones [27,28]); the maximum and average similarity (in %) of predicted viral proteins with the NCBI RefSeq viral proteome database and related virotypes (the five largest sets of reads corresponding to specific virotype in each sample are marked in bold).
Scaffolds | Detected/Predicted ORFs | Max Similarity | Average Similarity | Virotype | RefSeq_ID | V1 | V2 | V3 | V4 | 6C | BVP1 | BVP2 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
NODE_24_length_120194 | 107/18 | 60.3 | 40.7 | Caulobacter phage Cr30 | NC_025422 | 5257 | 2958 | 2668 | 3382 | 3497 | 3082 | 6846 |
NODE_49_length_86592 | 47/4 | 55.2 | 45.9 | Acanthocystis turfacea chlorella virus 1 | NC_008724 | 483 | 2557 | 394 | 30,145 | 1394 | 5429 | 5848 |
NODE_50_length_85337 | 80/3 | 42.3 | 38.5 | Klebsiella phage Sugarland | NC_042093 | 1397 | 5436 | 2179 | 29,768 | 7350 | 958 | 1127 |
NODE_86_length_73027 | 123/10 | 49.4 | 41.8 | Arthrobacter phage Laroye | NC_041947 | 698 | 6710 | 7623 | 2578 | 236 | 12 | 16 |
NODE_124_length_59027 | 64/6 | 56.8 | 46.6 | Azospirillum phage Cd | NC_010355 | 2 | 39 | 22 | 4 | 6958 | 15 | 18 |
NODE_206_length_42308 | 50/21 | 60.3 | 45.9 | Caulobacter phage Percy | NC_029092 | 6 | 151 | 226,165 | 20,294 | 6 | 1 | 0 |
NODE_252_length_37409 | 32/28 | 59.1 | 67.1 | Synechococcus phage S-SKS1 | NC_020851 | 657 | 118 | 91 | 381 | 7587 | 687 | 1819 |
NODE_257_length_37045 | 44/31 | 82.5 | 56.1 | Ralstonia phage RSK1 | NC_022915 | 0 | 1300 | 129,053 | 517 | 1 | 0 | 3 |
NODE_310_length_34107 | 52/10 | 78.4 | 47.0 | Acinetobacter phage YMC11/11/R3177 | NC_041866 | 10 | 0 | 5 | 10 | 8 | 17 | 125,574 |
NODE_312_length_34016 | 54/16 | 62.0 | 50.2 | Bacillus phage TP21-L | NC_011645 | 8 | 13 | 6 | 5 | 7 | 8 | 40,371 |
NODE_393_length_30742 | 40/1 | 77.3 | 36.7 | Mycobacterium phage 40AC | NC_023607 | 5458 | 9345 | 17,380 | 11,664 | 746 | 550 | 425 |
NODE_417_length_29904 | 43/10 | 36.7 | 45.7 | Acinetobacter phage phiAC-1 | NC_028995 | 6839 | 11,253 | 19,135 | 10,041 | 2803 | 7288 | 7206 |
NODE_424_length_29748 | 39/1 | 78.3 | 57.0 | Pelagibacter phage HTVC008M | NC_020484 | 13,391 | 8793 | 24,103 | 13,626 | 2036 | 1153 | 1194 |
NODE_461_length_28257 | 39/16 | 57.1 | 39.9 | Nonlabens phage P12024L | NC_018272 | 13,305 | 171 | 349 | 319 | 295 | 324 | 597 |
NODE_630_length_23488 | 36/4 | 67.3 | 50.9 | Cellulophaga phage phi46:3 | NC_021792 | 273 | 808 | 516 | 1129 | 1361 | 54,245 | 13,176 |
NODE_670_length_22640 | 20/16 | 39.6 | 51.2 | Synechococcus phage S-CBS4 | NC_016766 | 9496 | 4122 | 13,239 | 4213 | 3854 | 207 | 233 |
NODE_696_length_22189 | 25/21 | 65.4 | 60.1 | Synechococcus phage S-CBS4 | NC_016766 | 3703 | 2206 | 4370 | 3133 | 8250 | 443 | 495 |
NODE_841_length_19701 | 23/16 | 73.9 | 54.2 | Synechococcus phage S-CBP2 | NC_025455 | 17,988 | 5282 | 24,670 | 4705 | 1701 | 553 | 332 |
NODE_857_length_19451 | 36/21 | 85.8 | 52.7 | Synechococcus phage S-CBS4 | NC_016766 | 1081 | 480 | 1114 | 743 | 6190 | 352 | 505 |
NODE_862_length_19396 | 23/8 | 63.4 | 47.8 | Acanthamoeba polyphaga mimivirus | NC_014649 | 223 | 552 | 537 | 13,041 | 266 | 16 | 17 |
NODE_2600_length_10244 | 12/0 | 53.1 | NA | NA | NA | 28 | 26 | 25 | 15 | 14 | 219,170 | 60,924 |
NODE_2821_length_9717 | 10/1 | 81.6 | 39.9 | Thermoanaerobacterium phage THSA-485A | NC_018264 | 419 | 656 | 381 | 410 | 1772 | 32,617 | 8577 |
NODE_4064_length_7673 | 6/0 | NA | NA | NA | NA | 349 | 457 | 495 | 144 | 588 | 48,596 | 14,868 |
NODE_4094_length_7637 | 7/3 | 89.4 | 39.5 | Cyanophage NATL1A-7 | NC_016658 | 9762 | 425 | 3540 | 1096 | 167 | 35 | 25 |
NODE_4202_length_7505 | 7/0 | 39.9 | NA | NA | NA | 167 | 227 | 227 | 62 | 305 | 31,325 | 12,258 |