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. 2021 Apr 20;28(4):381–394. doi: 10.1089/cmb.2020.0431

Table 8.

UST-FM Data Structure Size, Shown in the Average Number of Bits per Distinct k-Mer in the Dataset

Dataset BOSS Unitigs-FM UST-FM
Zebrafish RNA-seq 7.5 7.9 5.5
Human RNA-seq 9.0 9.2 6.3
Human chromosome 14 8.7 6.9 4.8
Whole human genome 7.7 6.8 5.7
Human gut metagenome 8.8 5.4 4.9
Human RNA-seq (k = 61) 13.4 13.6 10.0

This was measured by taking the peak memory usage during membership queries.