Table 4.
OTUs: PCA 1 | ||||||||
Main | PC 1 | PC 3 | PC 4 | PC 6 | PC 8 | |||
contributors | (40%) | (9%) | (7%) | (3%) | (2%) | |||
Enterococcus sp. | 0.862 [0.96] 3 | 0.00 | 0.00 | 0.00 | 0.00 | |||
Escherichia/Shigella sp. | 0.00 | 0.25 [−0.65] | 0.25 [−0.57] | 0.07 | 0.01 | |||
Gemmiger | 0.00 | 0.01 | 0.28 [0.67] | 0.00 | 0.00 | |||
Faecalibacterium prausnitzii | 0.01 | 0.63 [0.86] | 0.16 [−0.38] | 0.06 | 0.02 | |||
Akkermansia muciniphila | 0.00 | 0.02 | 0.09 [0.41] | 0.22 [−0.45] | 0.09 | |||
Blautia luti | 0.00 | 0.01 | 0.05 | 0.26 [−0.56] | 0.02 | |||
Bifidobacterium sp. | 0.00 | 0.03 | 0.02 | 0.07 [−0.30] | 0.35 [−0.49] | |||
Bifidobacterium sp. | 0.00 | 0.00 | 0.00 | 0.19 [0.60] | 0.27 [−0.52] | |||
Streptococcus sp. | 0.00 | 0.00 | 0.00 | 0.02 | 0.13 [0.48] | |||
Prevotella copri | 0.12 [−0.42] | 0.00 | 0.00 | 0.01 | 0.00 | |||
OTUs: Multiple regression | ||||||||
R/R2 | 0.71/0.50 | 0.39/0.15 | 0.40/0.16 | 0.73/0.53 | 0.54/0.29 | |||
Age | 0.05 4 | 0.16 | 0.34 | 0.55 | 0.11 | |||
BMI | 0.03 | 0.10 | 0.92 | 0.09 | 0.35 | |||
Glucose | 0.07 3 | 0.58 | 0.07 | 0.39 | 0.76 | |||
ALT | 0.52 | 0.65 | 0.92 | 0.00 | 0.03 | |||
AST | 0.68 | 0.74 | 0.98 | 0.00 | 0.03 | |||
Bilirubin | 0.16 | 0.95 | 0.64 | 0.02 | 0.05 |
1 PCA stands for principle component analysis (based on covariance). Only those principal components that (a) account for the bigger fraction of the total data variance and/or (b) displayed a statistically significant correlation with patients’ characteristics are shown. 2 The values in bold show the two topmost contributions. 3 Factor loadings for variables (taxon relative abundance) are given in square brackets. 4 The values in bold italics and underlined italics are at p ≤ 0.05 and p ≤ 0.10, respectively.