Table 6.
The relative abundance of some bacterial families, genera and OTUs in patients’ feces before and after CCE.
| Taxon | Before CCE | After CCE | p-Value | ||
|---|---|---|---|---|---|
| Median | Mean ± SD | Median | Mean ± SD | ||
| Families | |||||
| Clostridiaceae_1 4 | 0.2 ± 0.4 | 0.3 ± 0.5 | 0.010 | ||
| Lachnospiraceae | 20.3 ± 14.8 | 16.6 ± 14.0 | 0.032 | ||
| Coriobacteriaceae | 1.9 ± 2.3 | 2.4 ± 2.8 | 0.033 | ||
| Peptoniphilaceae | 0.005 ± 0.013 | 0.002 ± 0.007 | 0.036 | ||
| Peptostreptococcaceae | 0.4 ± 0.6 | 0.6 ± 1.0 | 0.054 | ||
| Ruminococcaceae | 22.9 ± 15.9 | 19.5 ± 13.8 | 0.056 | ||
| Rhodospirillaceae | 0.1 ± 0.4 | 0.01 ± 0.05 | 0.059 | ||
| Enterococcaceae | 7.4 ± 20.8 | 13.6 ± 26.4 | 0.080 | ||
| Genera | |||||
| Clostridium s.s. | 0.2 ± 0.4 | 0.3 ± 0.5 | 0.010 | ||
| Gordonibacter | 0.01 ± 0.04 | 0.01 ± 0.07 | 0.036 | ||
| Peptoniphilus | 0.005 ± 0.013 | 0.002 ± 0.007 | 0.036 | ||
| un 1. Rhodospirillaceae | 0.08 ± 0.36 | 0.01 ± 0.05 | 0.059 | ||
| Gemmiger | 4.3 ± 7.4 | 3.2 ± 4.8 | 0.065 | ||
| Collinsella | 1.0 ± 1.8 | 1.3 ± 2.1 | 0.066 | ||
| Blautia | 6.4 ± 8.8 | 4.9 ± 7.3 | 0.067 | ||
| Enterococcus | 7.4 ± 20.8 | 13.6 ± 26.4 | 0.080 | ||
| Faecalibacterium | 7.7 ± 9.8 | 6.1 ± 8.6 | 0.089 | ||
| Roseburia | 2.8 ± 4.9 | 1.6 ± 2.5 | 0.089 | ||
| Dialister | 1.5 ± 2.5 | 1.0 ± 2.1 | 0.093 | ||
| Peptostreptococcus | 0.018 ± 0.063 | 0.024 ± 0.077 | 0.093 | ||
| Lachnospiracea i.s. | 2.1 ± 2.0 | 1.5 ± 1.6 | 0.094 | ||
| OTUs | |||||
| un.Lachnospiraceae | 0.09 ± 0.17 | 0.04 ± 0.11 | 0.003 | ||
| un.Clostridium s.s. 2 | 0.14 ± 0.43 | 0.3 ± 0.5 | 0.005 | ||
| un.Clostridium XlVa | 0.01 ± 0.03 | 0.03 ± 0.05 | 0.021 | ||
| un.Clostridiales | 0.02 ± 0.06 | 0.09 ± 0.19 | 0.023 | ||
| Clostridium leptum | 0.05 ± 0.10 | 0.03 ± 0.07 | 0.025 | ||
| un.Blautia | 0.02 ± 0.06 | 0.03 ± 0.08 | 0.029 | ||
| Ruminococcus faecis | 0.4 ± 1.4 | 0.6 ± 1.5 | 0.030 | ||
| un.Bacteroides | 2.1 ± 3.4 | 1.0 ± 2.0 | 0.033 | ||
| Dialister invisus | 1.0 ± 2.1 | 0.4 ± 1.0 | 0.035 | ||
| un.Ruminococcus | 0.15 ± 0.37 | 0.07 ± 0.24 | 0.036 | ||
| un.Ruminococcus | 0.2 ± 0.6 | 0.07 ± 0.29 | 0.042 | ||
| un.Lachnospiracea i.s. 3 | 0.5 ± 0.8 | 0.2 ± 0.4 | 0.050 | ||
| un.Coriobacteriaceae | 0.04 ± 0.09 | 0.14 ± 0.40 | 0.059 | ||
| un.Ruminococcaceae | 0.09 ± 0.16 | 0.18 ± 0.30 | 0.068 | ||
| un.Ruminococcaceae | 0.0008 ± 0.0017 | 0.0002 ± 0.001 | 0.076 | ||
| un.Enterococcus | 7.4 ± 20.8 | 13.6 ± 26.4 | 0.080 | ||
| un.Lachnospiraceae | 0.01 ± 0.02 | 0.002 ± 0.007 | 0.080 | ||
| un.Clostridiales | 0.01 ± 0.03 | 0.03 ± 0.08 | 0.083 | ||
| un.Collinsella | 1.0 ± 1.8 | 1.3 ± 2.1 | 0.093 | ||
| Peptostreptococcus stomatis | 0.02 ± 0.06 | 0.02 ± 0.08 | 0.093 | ||
1 un. stands for unclassified; 2 s.s. stands for sensu stricto; 3 i.s. stands for incertae sedis. 4 Gray-shadowed lines have p-values ≤ 0.05.