Table 1. Mapping statistics of clean reads with assembled unigenes.
| Samplesa | Clean reads | Clean reads ratio (%) | G+C (%) | ≥Q30 (%) | Mapped reads | Mapped ratio (%)b |
|---|---|---|---|---|---|---|
| Normoxia (21% O2) | 27,854,142 | 93.94 | 51.32 | 85.00 | 16,837,469 | 60.45 |
| 26,718,742 | 93.29 | 52.06 | 85.10 | 16,047,727 | 60.06 | |
| 29,040,231 | 92.45 | 51.75 | 85.00 | 17,804,759 | 61.31 | |
| Chronic hypoxia (10.5% O2) | 27,103,408 | 86.76 | 52.48 | 85.10 | 15,537,620 | 57.33 |
| 27,384,840 | 81.35 | 52.00 | 85.10 | 16,516,472 | 60.31 | |
| 24,116,984 | 99.75 | 50.47 | 92.90 | 16,003,380 | 66.36 | |
| Acute hypoxia (6.5% O2) | 23,280,246 | 90.95 | 52.19 | 85.00 | 13,880,001 | 59.62 |
| 25,090,462 | 99.46 | 50.65 | 93.30 | 14,717,266 | 58.66 | |
| 28,633,359 | 99.46 | 49.73 | 93.30 | 17,195,811 | 60.06 |
Notes.
21% O2, 10.5% O2, and 6.5% O2 include three biological replicates of E. fontanierii for the three oxygen concentrations.
the mapped ratio represents the ratio of mapped reads to clean reads.