Table 1.
Strain Origin | Molecular Type (No. of Isolates) | |||
---|---|---|---|---|
Clonal Complex | Sublineage | Sequence Type | cgMLST type | |
RTE 1
(n = 62) |
CC1 (7) | SL1 (7) | ST1 (7) | CT322 (4), CT5260 (2), CT4326 (1), |
CC2 (49) | SL2 (49) | ST2 (40) | CT4325 (9), CT4380 (9), CT2416 (4), CT4382 (4), CT5257 (1), CT5259 (1), CT7734 (1), CT7735 (1), CT7739 (1), CT7740 (1), CT7741 (1), CT7742 (1), CT7743 (1), CT7744 (1), CT7745 (1), CT7746 (1), CT7747 (1), CT7748 (1) | |
ST145 (9) | CT375 (9) | |||
CC6 (6) | SL6 (6) | ST6 (6) | CT461 (2), CT477 (2), CT434 (1), CT5608 (1) | |
Raw meat (n = 21) |
CC1 (2) | SL1 (2) | ST1 (2) | CT322 (1), CT7733 (1) |
CC2 (17) | SL2 (17) | ST2 (1) | CT2416 (1) | |
ST145 (16) | CT375 (16) | |||
CC6 (2) | SL6 (2) | ST6 (2) | CT7738 (1), CT5306 (1) | |
FPE 2
(n = 8) |
CC1 (1) | SL1 (1) | ST515 (1) | CT7737 (1) |
CC2 (4) | SL2 (4) | ST2 (3) | CT2416 (1), CT4325 (1), CT7736 (1) | |
ST145 (1) | CT375 (1) | |||
CC6 (3) | SL6 (3) | ST6 (3) | CT434 (2), CT4402 (1) |
1 RTE: ready-to-eat food. 2 FPE: food production environments.